RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MTSS1O43312 755 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 MT-CYBP00156 380 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 CAPNS1P04632 268 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 PROS1P07225 676 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 PYGMP11217 842 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 MYF5P13349 255 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 BLKP51451 505 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 CDK3Q00526 305 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 XRCC4Q13426 336 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 C1orf61Q13536 156 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 UBAP2LQ14157 1087 aaKnown RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 CCDC157Q569K6 752 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 FAXCQ5TGI0 409 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 AADACL2Q6P093 401 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 ZC3H18Q86VM9 953 aaKnown RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 NLRP8Q86W28 1048 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 HID1Q8IV36 788 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 TXLNBQ8N3L3 684 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 GALNT15Q8N3T1 639 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 FSTL5Q8N475 847 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 OR56A4Q8NGH8 313 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 SPATA22Q8NHS9 363 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 HTR3CQ8WXA8 447 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 EID2BQ96D98 161 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 FRMD8Q9BZ67 464 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-211ENST00000590499 SLC13A1Q9BZW2 595 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 ABCG8Q9H221 673 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 USP29Q9HBJ7 922 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 KLQ9UEF7 1012 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 ZFHX4Q86UP3 3567 aa11.17□□□□□ -0.62
SMAD4-211ENST00000590499 C1orf232A0A0U1RR37 186 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 POM121CA8CG34 1229 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 YY2O15391 372 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ARHGAP6O43182 974 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 CLDN7O95471 211 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 FTCDO95954 541 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 CEACAM5P06731 702 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 GP1BAP07359 652 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 NFKB1P19838 968 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 KELP23276 732 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 CLDN6P56747 220 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 DAB2P98082 770 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 OTUD4Q01804 1114 aaKnown RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 CDK18Q07002 472 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 GALNT3Q14435 633 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ELOCQ15369 112 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 RAET1GQ6H3X3 334 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 KDELC1Q6UW63 502 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ADAMTSL4Q6UY14 1074 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 PEX26Q7Z412 305 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 TMPRSS12Q86WS5 348 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 MARCH9Q86YJ5 346 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 SLC35F3Q8IY50 421 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 NRSN1Q8IZ57 195 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 SYCE1Q8N0S2 351 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 RNF10Q8N5U6 811 aaKnown RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 SCAMP4Q969E2 229 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 AP2M1Q96CW1 435 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 WDR24Q96S15 920 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 VAT1Q99536 393 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 MLPHQ9BV36 600 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 ADGRE3Q9BY15 652 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 MRPL40Q9NQ50 206 aaKnown RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 PHPT1Q9NRX4 125 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 CD84Q9UIB8 345 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 AMFRQ9UKV5 643 aa11.16□□□□□ -0.62
SMAD4-211ENST00000590499 PACSIN2Q9UNF0 486 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-211ENST00000590499 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 PRSS38A1L453 326 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 EME2A4GXA9 379 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 FAM149AA5PLN7 773 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 NDST3O95803 873 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 TNFP01375 233 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 FUCA1P04066 466 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 ANXA6P08133 673 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 RBL1P28749 1068 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 MAP2K3P46734 347 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 SPINT3P49223 89 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 KLF1Q13351 362 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 HENMT1Q5T8I9 393 aaKnown RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 HES3Q5TGS1 186 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 RD3Q7Z3Z2 195 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 CACTIN-AS1Q8N1I8 211 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 CCDC112Q8NEF3 446 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 OXNAD1Q96HP4 312 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 COX14Q96I36 57 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 FCRL5Q96RD9 977 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms