RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 JCHAINP01591 159 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 ATP1A1P05023 1023 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 FGF3P11487 239 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 MPSTP25325 297 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 CD86P42081 329 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 FASLGP48023 281 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 SPINT3P49223 89 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC18A3Q16572 532 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 OR10G6Q8NH81 332 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC37A2Q8TED4 501 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 EXTL1Q92935 676 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 DEF6Q9H4E7 631 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 FAM83DQ9H4H8 585 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 STN1Q9H668 368 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 DTLQ9NZJ0 730 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 PKD2L2Q9NZM6 624 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 PCDHGA4Q9Y5G9 962 aa17.8■□□□□ 0.44
PRKCSH-211ENST00000590098 TLN1Q9Y490 2541 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 ANKRD66B4E2M5 251 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 KCNK1O00180 336 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 THRAP10827 490 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 KDELR1P24390 212 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 HNRNPH3P31942 346 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 CSF2RBP32927 897 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 MAN1A1P33908 653 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC10A2Q12908 348 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 MESDQ14696 234 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 QPCTQ16769 361 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 LINC00303Q3SY05 128 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 TMEM71Q6P5X7 295 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 SFRP1Q8N474 314 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 EXD3Q8N9H8 876 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 JPH3Q8WXH2 748 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 RNF157Q96PX1 679 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 PACSIN1Q9BY11 444 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC39A1Q9NY26 324 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 PRKAB1Q9Y478 270 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 PCDHGA3Q9Y5H0 932 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
PRKCSH-211ENST00000590098 DUX1O43812 170 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 DNAJC6O75061 913 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 PPIDQ08752 370 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 HENMT1Q5T8I9 393 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 ZNF761Q86XN6 746 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 FAM129CQ86XR2 697 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 RAPGEF5Q92565 580 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 ART4Q93070 314 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 SH3KBP1Q96B97 665 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 WDR24Q96S15 920 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 DDA1Q9BW61 102 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 ASPSCR1Q9BZE9 553 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 FAM117AQ9C073 453 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 XPO4Q9C0E2 1151 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 ZNHIT6Q9NWK9 470 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 TMEM9Q9P0T7 183 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 TBC1D29Q9UFV1 150 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 CNOT6Q9ULM6 557 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 HEMK1Q9Y5R4 338 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 OAS3Q9Y6K5 1087 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 MYO18BQ8IUG5 2567 aa17.78■□□□□ 0.44
PRKCSH-211ENST00000590098 LRRD1A4D1F6 860 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 FADS2P1A8MWK0 482 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC28A2O43868 658 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 EML2O95834 649 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 MMP2P08253 660 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 TMEM253P0C7T8 217 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 SFTPCP11686 197 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 ACP5P13686 325 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC2A4P14672 509 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 WT1P19544 449 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 IFI35P80217 286 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 HHEXQ03014 270 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 AP1B1Q10567 949 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 NFATC3Q12968 1075 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 DCAF12Q5T6F0 453 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 LYSMD3Q7Z3D4 306 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 SLC9B2Q86UD5 537 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 IL22RA1Q8N6P7 574 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 OR8K1Q8NGG5 319 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 HERPUD2Q9BSE4 406 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 SARS2Q9NP81 518 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 KCNK6Q9Y257 313 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 B3GALT1Q9Y5Z6 326 aa17.77■□□□□ 0.44
PRKCSH-211ENST00000590098 EFCAB7A8K855 629 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 B4E171 279 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 AKR1B10O60218 316 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 SNX2O60749 519 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 TSPAN7P41732 249 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 RAB15P59190 212 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 CYP4F2P78329 520 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 ZBTB17Q13105 803 aa17.76■□□□□ 0.43
PRKCSH-211ENST00000590098 NFATC2Q13469 925 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms