RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CRYMQ14894 314 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 LONRF1Q17RB8 773 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 PEAR1Q5VY43 1037 aaPredicted RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 Q6ZSR6 202 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 DCP2Q8IU60 420 aaKnown RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 IGDCC3Q8IVU1 814 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 PALM2Q8IXS6 379 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 PELI3Q8N2H9 469 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 OR13H1Q8NG92 308 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 OR4L1Q8NH43 312 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 C1orf216Q8TAB5 229 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 BTN2A2Q8WVV5 523 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.24
VMP1-210ENST00000589823 GLYATL1Q969I3 302 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 TTC1Q99614 292 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 WDR83Q9BRX9 315 aaKnown RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 TEX101Q9BY14 249 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 SUDS3Q9H7L9 328 aaPredicted RBP13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A7Q9HAW7 530 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A10Q9HAW8 530 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 UGT1A8Q9HAW9 530 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 TMEM74BQ9NUR3 256 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
VMP1-210ENST00000589823 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.24
VMP1-210ENST00000589823 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 OR51F1A6NGY5 319 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 VILLO15195 856 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 SLC25A14O95258 325 aaPredicted RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 TUBBP07437 444 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 HOXC4P09017 264 aaPredicted RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 KIAA1024LP59773 190 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 CDK3Q00526 305 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 SLMAPQ14BN4 828 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 DUOXA1Q1HG43 343 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 CCNI2Q6ZMN8 369 aaPredicted RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 UNC5AQ6ZN44 842 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 OTUD6BQ8N6M0 293 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 SUMF1Q8NBK3 374 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 GABPB2Q8TAK5 448 aaPredicted RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 FUBP1Q96AE4 644 aaKnown RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 ARRDC1-AS1Q9H2J1 176 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 FAM96AQ9H5X1 160 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 C20orf96Q9NUD7 363 aaPredicted RBP13.52□□□□□ -0.25
VMP1-210ENST00000589823 PLXNA2O75051 1894 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.25
VMP1-210ENST00000589823 TLR4O00206 839 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 ASMTLO95671 621 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 WNT1P04628 370 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 CFIP05156 583 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 RETP07949 1114 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 GSTA2P09210 222 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 MYCLP1P12525 358 aaPredicted RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 FOXN2P32314 431 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 MPLP40238 635 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 VSNL1P62760 191 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 NFATC4Q14934 902 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 STEAP4Q687X5 459 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 MRNIPQ6NTE8 343 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 LAYNQ6UX15 382 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 CERS6Q6ZMG9 384 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 CAPN12Q6ZSI9 719 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 KCNMB4Q86W47 210 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 GSDMBQ8TAX9 411 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 C9orf72Q96LT7 481 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
VMP1-210ENST00000589823 ZCCHC2Q9C0B9 1178 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 PPANQ9NQ55 473 aaKnown RBP13.51□□□□□ -0.25
VMP1-210ENST00000589823 SMOXQ9NWM0 555 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms