RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PPP1R2P3Q6NXS1 205 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 IGFL3Q6UXB1 125 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 LEKR1Q6ZMV7 388 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CXXC5Q7LFL8 322 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 TGIF2LYQ8IUE0 185 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 DEFB106AQ8N104 65 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CBARPQ8N350 705 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 TXLNBQ8N3L3 684 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SFRP1Q8N474 314 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SPC24Q8NBT2 197 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 NETO2Q8NC67 525 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 MSANTD4Q8NCY6 345 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CPLX3Q8WVH0 158 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SEC14L1Q92503 715 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 NCSTNQ92542 709 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 TRIM44Q96DX7 344 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 HMCESQ96FZ2 354 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CCDC120Q96HB5 630 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 AHCYL2Q96HN2 611 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 NAP1L5Q96NT1 182 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 TRIM62Q9BVG3 475 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 FRMD8Q9BZ67 464 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 ILKAPQ9H0C8 392 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 HSD3B7Q9H2F3 369 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 WDR26Q9H7D7 661 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ZBTB20Q9HC78 741 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 NLRC4Q9NPP4 1024 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 ST7Q9NRC1 585 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 PIGVQ9NUD9 493 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 OGFRQ9NZT2 677 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 C5AR2Q9P296 337 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 DNAJC12Q9UKB3 198 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 AJAP1Q9UKB5 411 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 KIAA1257Q9ULG3 409 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SUFUQ9UMX1 484 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 RPH3AQ9Y2J0 694 aaPredicted RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 PCDHB4Q9Y5E5 795 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 BZW2Q9Y6E2 419 aaKnown RBP6.05□□□□□ -1.44
VPS25-204ENST00000589577 CUBNO60494 3623 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 AKAP6Q13023 2319 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 CNTRLQ7Z7A1 2325 aa6.05□□□□□ -1.44
VPS25-204ENST00000589577 SPTBP11277 2137 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 TRBV23OR9-2A0A075B6M9 112 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 CXorf51AA0A1B0GTR3 108 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 PIGNO95427 931 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 C9P02748 559 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 C8BP07358 591 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 PLEKP08567 350 aaPredicted RBP6.04□□□□□ -1.44
VPS25-204ENST00000589577 CCNYL3P0C7X3 344 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 MYCLP1P12525 358 aaPredicted RBP6.04□□□□□ -1.44
VPS25-204ENST00000589577 EDN3P14138 238 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SLC9A1P19634 815 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 CA5AP35218 305 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 KRT9P35527 623 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ACTR1BP42025 376 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 GLRBP48167 497 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 POLD2P49005 469 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SNX16P57768 344 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ACTR1AP61163 376 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
VPS25-204ENST00000589577 CDK17Q00537 523 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 TLE4Q04727 773 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 LTBQ06643 244 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ELP6Q0PNE2 266 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 NME3Q13232 169 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 IL11RAQ14626 422 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 LLGL1Q15334 1064 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ASIC2Q16515 512 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 UGP2Q16851 508 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS25-204ENST00000589577 VWA2Q5GFL6 755 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 VWA5B1Q5TIE3 1220 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 DENND1BQ6P3S1 775 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 TMEM270Q6UE05 265 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ZNF783Q6ZMS7 281 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 Q6ZS92 163 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 RRAGAQ7L523 313 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 APTXQ7Z2E3 356 aaKnown RBP6.04□□□□□ -1.44
VPS25-204ENST00000589577 MRGPRGQ86SM5 289 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 TMEM110Q86TL2 294 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 RASGRP3Q8IV61 690 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 OR8K1Q8NGG5 319 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 GRHL3Q8TE85 626 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 KAT5Q92993 513 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 HDAC11Q96DB2 347 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 C9orf72Q96LT7 481 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SLC38A3Q99624 504 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SLX1AQ9BQ83 275 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 GPR87Q9BY21 358 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 CXXC4Q9H2H0 198 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 MCCC2Q9HCC0 563 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 AGPAT4Q9NRZ5 378 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 FGF21Q9NSA1 209 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SEPT11Q9NVA2 429 aaKnown RBP6.04□□□□□ -1.44
VPS25-204ENST00000589577 ARHGEF38Q9NXL2 777 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 SIK3Q9Y2K2 1263 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 MFHAS1Q9Y4C4 1052 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 FHOD1Q9Y613 1164 aa6.04□□□□□ -1.44
VPS25-204ENST00000589577 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms