RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GMPRP36959 345 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 PLA2G5P39877 138 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CCR2P41597 374 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 MAPRE2Q15555 327 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CDKN3Q16667 212 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 LSM12Q3MHD2 195 aaKnown RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 SLC9B1Q4ZJI4 515 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 ATXN7L2Q5T6C5 722 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 ANKS6Q68DC2 871 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 C22orf39Q6P5X5 142 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 BRAT1Q6PJG6 821 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 PAQR3Q6TCH7 311 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 ATG14Q6ZNE5 492 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 RINLQ6ZS11 566 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CUZD1Q86UP6 607 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 ADGRG2Q8IZP9 1017 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 SPATA6LQ8N4H0 392 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 FAM13CQ8NE31 585 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 SGF29Q96ES7 293 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 ATOH8Q96SQ7 321 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CCT7Q99832 543 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 RTKNQ9BST9 563 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 BBS2Q9BXC9 721 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 TM6SF2Q9BZW4 377 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 CLPBQ9H078 707 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 P2RY12Q9H244 342 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 DCLRE1BQ9H816 532 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 MEAF6Q9HAF1 191 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 LATS2Q9NRM7 1088 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 FBXO10Q9UK96 956 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 INTS6Q9UL03 887 aaKnown RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 RNF112Q9ULX5 631 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 DHRS7Q9Y394 339 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 TNPO3Q9Y5L0 923 aaKnown RBP10.33□□□□□ -0.76
VPS25-203ENST00000589520 PLXNA4Q9HCM2 1894 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
VPS25-203ENST00000589520 GLYATL1P3A0A0U1RQE8 302 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 C1orf232A0A0U1RR37 186 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 AGAP14A8MT82 685 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 K7ERQ8 282 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 ZBTB14O43829 449 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 GPC4O75487 556 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 SUPT7LO94864 414 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 MLYCDO95822 493 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 SRPRAP08240 638 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 TYRP14679 529 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 GJA1P17302 382 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 POLR2EP19388 210 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 DGKAP23743 735 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 HNF1BP35680 557 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 RGS4P49798 205 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 ATP4BP51164 291 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 MXRA7P84157 204 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 KDSRQ06136 332 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 KLF10Q13118 480 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 TTLL9Q3SXZ7 439 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 UNC50Q53HI1 259 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 DGKKQ5KSL6 1271 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 METTL2BQ6P1Q9 378 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 TTC23LQ6PF05 361 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 C16orf89Q6UX73 402 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 LYSMD3Q7Z3D4 306 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 NET1Q7Z628 596 aaPredicted RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 TMEM25Q86YD3 366 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS25-203ENST00000589520 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 FBXO39Q8N4B4 442 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 RBM15BQ8NDT2 890 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 ASIC4Q96FT7 647 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 PLEKHG4BQ96PX9 1271 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 GPR21Q99679 349 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 MIPEPQ99797 713 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 OSBPL1AQ9BXW6 950 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 NUF2Q9BZD4 464 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 GSTO2Q9H4Y5 243 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 ASB8Q9H765 288 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 OBP2AQ9NY56 170 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 PLK2Q9NYY3 685 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 GTSE1Q9NYZ3 720 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 BCAP29Q9UHQ4 241 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 CLEC4EQ9ULY5 219 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 MRPS23Q9Y3D9 190 aaKnown RBP10.32□□□□□ -0.76
VPS25-203ENST00000589520 TRAF6Q9Y4K3 522 aa10.32□□□□□ -0.76
VPS25-203ENST00000589520 NEDD8-MDP1E9PL57 170 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 SNX2O60749 519 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 RFPL2O75678 378 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 PRAMEF1O95521 474 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 ADH1CP00326 375 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CBSLP0DN79 551 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 COX4I1P13073 169 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 GFAPP14136 432 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 ACRV1P26436 265 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 CBSP35520 551 aa10.31□□□□□ -0.76
VPS25-203ENST00000589520 NSG1P42857 185 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms