RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CEP97	Q8IW35	865 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SMYD1	Q8NB12	490 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	DTX3L	Q8TDB6	740 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	EID2B	Q96D98	161 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	MPP4	Q96JB8	637 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	C1QTNF1	Q9BXJ1	281 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	MANSC1	Q9H8J5	431 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	NPHS2	Q9NP85	383 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SIRPG	Q9P1W8	387 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF106	Q9H2Y7	1883 aa	Known RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	HOXC11	O43248	304 aa	Predicted RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	PROC	P04070	461 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ADH5	P11766	374 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	LPO	P22079	712 aa	Predicted RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SERPINB3	P29508	390 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	POLD2	P49005	469 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZBTB16	Q05516	673 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	BCL2L1	Q07817	233 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	CDC16	Q13042	620 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	USP10	Q14694	798 aa	Known RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	GAB4	Q2WGN9	574 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	CFAP157	Q5JU67	520 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	MBLAC2	Q68D91	279 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	GET4	Q7L5D6	327 aa	Predicted RBP	15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	AHI1	Q8N157	1196 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	EFHB	Q8N7U6	833 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	OR4L1	Q8NH43	312 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	BPIFB1	Q8TDL5	484 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	TIFA	Q96CG3	184 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	OMD	Q99983	421 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	CEP44	Q9C0F1	390 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	TRPV4	Q9HBA0	871 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	GDE1	Q9NZC3	331 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	HEY2	Q9UBP5	337 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC25A13	Q9UJS0	675 aa		15.35	■□□□□ 0.05
DDX39A-209	ENST00000589318	C2orf81	A6NN90	581 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	CD3EAP	O15446	510 aa	Known RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	PHGDH	O43175	533 aa	Known RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	BPGM	P07738	259 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ALPI	P09923	528 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	PRSS56	P0CW18	603 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	UQCRB	P14927	111 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ARSA	P15289	507 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	BGN	P21810	368 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	TAS2R39	P59534	338 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	SNRPD1	P62314	119 aa	Known RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	PHEX	P78562	749 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ANKRD54	Q6NXT1	300 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	PDSS2	Q86YH6	399 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ETFBKMT	Q8IXQ9	262 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	PCDH20	Q8N6Y1	951 aa	Known RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ST13P5	Q8NFI4	369 aa	Predicted RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZFYVE19	Q96K21	471 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	MRGPRX3	Q96LB0	322 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	BTBD9	Q96Q07	612 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	NSUN3	Q9H649	340 aa	Known RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ATP13A3	Q9H7F0	1226 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	MAGEE1	Q9HCI5	957 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	POLR3B	Q9NW08	1133 aa	Predicted RBP	15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	HACD3	Q9P035	362 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF711	Q9Y462	761 aa		15.34	■□□□□ 0.05
DDX39A-209	ENST00000589318	KIAA1549L	Q6ZVL6	1849 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318		A0A0J9YVX5	310 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318		A0A0J9YYE9	177 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ARHGAP10	A1A4S6	786 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	OTOL1	A6NHN0	477 aa	Predicted RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	HEPACAM2	A8MVW5	462 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	KLF11	O14901	512 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	TM7SF2	O76062	418 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	TRBC1	P01850	177 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CTPS1	P17812	591 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	RPL5	P46777	297 aa	Known RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ACADVL	P49748	655 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CLCN5	P51795	746 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	EPHB1	P54762	984 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	RAB10	P61026	200 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	MESP2	Q0VG99	397 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	DCTN2	Q13561	401 aa	Known RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ZNF460	Q14592	562 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	TYSND1	Q2T9J0	566 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	MYLK3	Q32MK0	819 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	DPY19L3	Q6ZPD9	716 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	RINL	Q6ZS11	566 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CROCCP3	Q8IVE0	287 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	SCUBE1	Q8IWY4	988 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CENPL	Q8N0S6	344 aa	Predicted RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	OR6Y1	Q8NGX8	325 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	GABPB2	Q8TAK5	448 aa	Predicted RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	SORCS1	Q8WY21	1168 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ECHDC3	Q96DC8	303 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ELMO2	Q96JJ3	720 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	OLFM1	Q99784	485 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	FAM83C	Q9BQN1	747 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CATSPERZ	Q9NTU4	200 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	HECA	Q9UBI9	543 aa	Predicted RBP	15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	ERVW-1	Q9UQF0	538 aa		15.33	■□□□□ 0.05
DDX39A-209	ENST00000589318	SLC4A1	P02730	911 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	OGN	P20774	298 aa	Known RBP	15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	SAT1	P21673	171 aa		15.33	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms