RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MMEL1Q495T6 779 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 CDONQ4KMG0 1287 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 PPP6R3Q5H9R7 873 aaPredicted RBP3.48□□□□□ -1.85
SMAD4-207ENST00000589076 HIST2H2BCQ6DN03 193 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 HIST2H2BDQ6DRA6 164 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 KIAA0930Q6ICG6 404 aaPredicted RBP3.48□□□□□ -1.85
SMAD4-207ENST00000589076 ENOSF1Q7L5Y1 443 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 TAOK1Q7L7X3 1001 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 CACNA2D4Q7Z3S7 1137 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 GALNT5Q7Z7M9 940 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 TSPAN33Q86UF1 283 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 TMTC2Q8N394 836 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 INPP4AQ96PE3 977 aaPredicted RBP3.48□□□□□ -1.85
SMAD4-207ENST00000589076 ACOX2Q99424 681 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 MAGIXQ9H6Y5 334 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 ZNF556Q9HAH1 456 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 SLC28A3Q9HAS3 691 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 ANKEF1Q9NU02 776 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 COPG2Q9UBF2 871 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 NRBP1Q9UHY1 535 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 R3HDM2Q9Y2K5 976 aaKnown RBP3.48□□□□□ -1.85
SMAD4-207ENST00000589076 ARHGEF40Q8TER5 1519 aa3.48□□□□□ -1.85
SMAD4-207ENST00000589076 A0A0B4J293 547 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 A0A1B0GVT2 93 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 C1orf226A1L170 272 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 SMTNL1A8MU46 457 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 INAFM1C9JVW0 142 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 J3KR12 359 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 VCYO14598 125 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 ZIC3O60481 467 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 GJB3O75712 270 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 NR2F1P10589 423 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 AKR1B1P15121 316 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 TCEA1P23193 301 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 PON1P27169 355 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 EIF2DP41214 584 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 MFAP4P55083 255 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 IFI35P80217 286 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 MRPS5P82675 430 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 TDRD12Q587J7 1177 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 LRIF1Q5T3J3 769 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 TYW3Q6IPR3 259 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 B3GNT6Q6ZMB0 384 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 CFAP77Q6ZQR2 320 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 CREB3L2Q70SY1 520 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 DPPA4Q7L190 304 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 ZC3HC1Q86WB0 502 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 OR8H2Q8N162 312 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 LSMEM1Q8N8F7 131 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 POC5Q8NA72 575 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 HJURPQ8NCD3 748 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 OR8K5Q8NH50 307 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 LRRC59Q96AG4 307 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 ELMOD3Q96FG2 381 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 SERINC2Q96SA4 455 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 KXD1Q9BQD3 176 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 MXD3Q9BW11 206 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 KCNN2Q9H2S1 579 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 PLK3Q9H4B4 646 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 PPP1R3EQ9H7J1 279 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 GIMAP4Q9NUV9 329 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 SETD4Q9NVD3 440 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 SEC63Q9UGP8 760 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 KCNG2Q9UJ96 466 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 CDC14AQ9UNH5 594 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 EXO1Q9UQ84 846 aaKnown RBP3.47□□□□□ -1.85
SMAD4-207ENST00000589076 CMAHPQ9Y471 501 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 PTGDR2Q9Y5Y4 395 aa3.47□□□□□ -1.85
SMAD4-207ENST00000589076 OR2A25A4D2G3 310 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 CTDSP2O14595 271 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 TIMM23O14925 209 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 PLOD3O60568 738 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 TPPPO94811 219 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 PGM3O95394 542 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 GLUD1P00367 558 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 CYC1P08574 325 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 G6PDP11413 515 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 SELLP14151 372 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 UBA1P22314 1058 aaKnown RBP3.46□□□□□ -1.86
SMAD4-207ENST00000589076 RRM1P23921 792 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 NNMTP40261 264 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 SLC15A1P46059 708 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 GLUD2P49448 558 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 MXI1P50539 228 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 ABATP80404 500 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 ECT2LQ008S8 904 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 DDR1Q08345 913 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 Q0VFX4 171 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 BECN1Q14457 450 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 NTRK2Q16620 822 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 PNLIPRP3Q17RR3 467 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 C15orf59Q2T9L4 293 aaPredicted RBP3.46□□□□□ -1.86
SMAD4-207ENST00000589076 EFHC1Q5JVL4 640 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 TMCO3Q6UWJ1 677 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 PRPF39Q86UA1 669 aaKnown RBP3.46□□□□□ -1.86
SMAD4-207ENST00000589076 EPHX4Q8IUS5 362 aa3.46□□□□□ -1.86
SMAD4-207ENST00000589076 MCEMP1Q8IX19 187 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms