RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 DPP3Q9NY33 737 aa7.95□□□□□ -1.14
ATG4D-210ENST00000588972 GDE1Q9NZC3 331 aa7.95□□□□□ -1.14
ATG4D-210ENST00000588972 CGNQ9P2M7 1197 aaKnown RBP7.95□□□□□ -1.14
ATG4D-210ENST00000588972 ANGPTL2Q9UKU9 493 aa7.95□□□□□ -1.14
ATG4D-210ENST00000588972 NOTCH4Q99466 2003 aa7.95□□□□□ -1.14
ATG4D-210ENST00000588972 COL4A2P08572 1712 aa7.95□□□□□ -1.14
ATG4D-210ENST00000588972 LAMA1P25391 3075 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 STX16-NPEPL1H3BU86 382 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 STX16O14662 325 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ADAM12O43184 909 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ITGB3P05106 788 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 KRT19P08727 400 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 TMEM191BP0C7N4 346 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 CASP6P55212 293 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SNRPFP62306 86 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 POU5F1Q01860 360 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 OCA2Q04671 838 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ELAVL2Q12926 359 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 FZD5Q13467 585 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 PSMD6Q15008 389 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 RBM20Q5T481 1227 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ACAD10Q6JQN1 1059 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 MSANTD2Q6P1R3 559 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 NEK10Q6ZWH5 1172 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 CLNKQ7Z7G1 428 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 LNX1Q8TBB1 728 aaPredicted RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SNRNP27Q8WVK2 155 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 HMGB4Q8WW32 186 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ING5Q8WYH8 240 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ELSPBP1Q96BH3 223 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 ERP27Q96DN0 273 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 C7orf26Q96N11 449 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SEMA4GQ9NTN9 838 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 INTS13Q9NVM9 706 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 HCFC1R1Q9NWW0 138 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 BCCIPQ9P287 314 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 POLG2Q9UHN1 485 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SIX4Q9UIU6 781 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 NDRG2Q9UN36 371 aaKnown RBP7.94□□□□□ -1.14
ATG4D-210ENST00000588972 TRAF3IP3Q9Y228 551 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 SLC27A6Q9Y2P4 619 aa7.94□□□□□ -1.14
ATG4D-210ENST00000588972 PKD1L2Q7Z442 2459 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 A0A1W2PPH5 198 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 A0A1W2PS29 197 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 SHISA7A6NL88 538 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 LRRIQ3A6PVS8 624 aaPredicted RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 PIRO00625 290 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 ZNF185O15231 689 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 AKAP3O75969 853 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 GFPT2O94808 682 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 GPANK1O95872 356 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 RHOP08100 348 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 TNNI1P19237 187 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 CD6P30203 668 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 APOBEC3AP31941 199 aaPredicted RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 MAN2A2P49641 1150 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 PDE6CP51160 858 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 STX17P56962 302 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 RNASE9P60153 205 aaKnown RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 SF3A3Q12874 501 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 DYRK1AQ13627 763 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 NAIF1Q69YI7 327 aaPredicted RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 ANKRD40Q6AI12 368 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 FOXR2Q6PJQ5 311 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 CLEC9AQ6UXN8 241 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 WDR49Q8IV35 697 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 TMEM151BQ8IW70 566 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 FAM109AQ8N4B1 249 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 CSGALNACT2Q8N6G5 542 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 CXorf38Q8TB03 319 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 MCRS1Q96EZ8 462 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 ANKRD36BP1Q96IX9 119 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 FNBP1Q96RU3 617 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 TSPAN18Q96SJ8 248 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 MECRQ9BV79 373 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 MTRRQ9UBK8 725 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 SERTAD3Q9UJW9 196 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 RIMKLBQ9ULI2 386 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 NFU1Q9UMS0 254 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 SLC30A1Q9Y6M5 507 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 TICRRQ7Z2Z1 1910 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 SMG1Q96Q15 3661 aaKnown RBP7.93□□□□□ -1.14
ATG4D-210ENST00000588972 RALGAPA1Q6GYQ0 2036 aa7.93□□□□□ -1.14
ATG4D-210ENST00000588972 PRAMEF33A0A0G2JMD5 474 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 M0QZQ0 153 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 PSMA7O14818 248 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TRAPPC3O43617 180 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 PRAMEF10O60809 474 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ZFPL1O95159 310 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 RTN3O95197 1032 aaPredicted RBP7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TNNC2P02585 160 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TRIM49P0CI25 452 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms