RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 HEATR4Q86WZ0 1026 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 BTN2A2Q8WVV5 523 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 SGSM3Q96HU1 749 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 DNAJC1Q96KC8 554 aaKnown RBP19.44■□□□□ 0.7
CIRBP-220ENST00000588917 SIGLEC10Q96LC7 697 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 WDR92Q96MX6 357 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 CNTNAP3BQ96NU0 1288 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 AGAP2Q99490 1192 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 TTC1Q99614 292 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 CNTNAP3Q9BZ76 1288 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 TSPYL1Q9H0U9 437 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 ASB8Q9H765 288 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 EPB41L5Q9HCM4 733 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 SYBUQ9NX95 663 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 FKBPLQ9UIM3 349 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 FNDC3AQ9Y2H6 1198 aaKnown RBP19.44■□□□□ 0.7
CIRBP-220ENST00000588917 EPG5Q9HCE0 2579 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 PRAMEF1O95521 474 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 TTC4O95801 387 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 CER1O95813 267 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 SOD1P00441 154 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 POLBP06746 335 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 ITGALP20701 1170 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 ARRB1P49407 418 aaPredicted RBP19.43■□□□□ 0.7
CIRBP-220ENST00000588917 BLKP51451 505 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 PLTPP55058 493 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 PRAMEP78395 509 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 GRIK2Q13002 908 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 CHRNA6Q15825 494 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 ENPP7Q6UWV6 458 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 CEP128Q6ZU80 1094 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 CENPUQ71F23 418 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 SNX20Q7Z614 316 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 PARGQ86W56 976 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 PHYKPLQ8IUZ5 450 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 GLYATL1Q969I3 302 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 ULK4Q96C45 1275 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 STAMBPL1Q96FJ0 436 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 COX14Q96I36 57 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 TBATAQ96M53 351 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 TRIM39Q9HCM9 518 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 GRHL1Q9NZI5 618 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 SNX11Q9Y5W9 270 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 MAD1L1Q9Y6D9 718 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 TNRC6BQ9UPQ9 1833 aaKnown RBP19.43■□□□□ 0.7
CIRBP-220ENST00000588917 SPAG17Q6Q759 2223 aa19.43■□□□□ 0.7
CIRBP-220ENST00000588917 ACACBO00763 2458 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 EIF3HO15372 352 aaKnown RBP eCLIP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 YKT6O15498 198 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 ENGP17813 658 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 MC4RP32245 332 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 PPARGP37231 505 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 CRADDP78560 199 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 XIAPP98170 497 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 NFATC2Q13469 925 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 ATP13A5Q4VNC0 1218 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 LDLRAP1Q5SW96 308 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 FNBP1LQ5T0N5 605 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 LYPLAL1Q5VWZ2 237 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 TMEM135Q86UB9 458 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 SPATS2Q86XZ4 545 aaKnown RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 IFT20Q8IY31 132 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 SLC22A18ASQ8N1D0 253 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 OR56A4Q8NGH8 313 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 OR6P1Q8NGX9 317 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 OR4L1Q8NH43 312 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 HEXDCQ8WVB3 486 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 HDAC10Q969S8 669 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.42■□□□□ 0.79e-7■□□□□ 9.4
CIRBP-220ENST00000588917 ELF4Q99607 663 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 EBNA1BP2Q99848 306 aaKnown RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 PHACTR1Q9C0D0 580 aa19.42■□□□□ 0.7
CIRBP-220ENST00000588917 DMGDHQ9UI17 866 aaKnown RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 CNOT6Q9ULM6 557 aaKnown RBP19.42■□□□□ 0.7
CIRBP-220ENST00000588917 AGAP14A8MT82 685 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 FADS2P1A8MWK0 482 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 GPR89AB7ZAQ6 455 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 H3BM21 787 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 TP73O15350 636 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 VEGFDO43915 354 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 GDF9O60383 454 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 SLU7O95391 586 aaKnown RBP19.41■□□□□ 0.7
CIRBP-220ENST00000588917 ADRB1P08588 477 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 GPR89BP0CG08 455 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PGAM1P18669 254 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 RXRGP48443 463 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PPARDQ03181 441 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 CACNG1Q06432 222 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 DHX9Q08211 1270 aaKnown RBP19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PEX6Q13608 980 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 FZD2Q14332 565 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 ZNF423Q2M1K9 1284 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 HLA-BQ31612 363 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 BBS9Q3SYG4 887 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 ZRANB3Q5FWF4 1079 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PPM1JQ5JR12 505 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 AFTPHQ6ULP2 937 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 CERS6Q6ZMG9 384 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 PELI3Q8N2H9 469 aa19.41■□□□□ 0.7
CIRBP-220ENST00000588917 OR13J1Q8NGT2 312 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms