RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ACOX1Q15067 660 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 INSCQ1MX18 579 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 TAF1BQ53T94 588 aaPredicted RBP30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 Q6ZVL8 140 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 KBTBD6Q86V97 674 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 NLRP8Q86W28 1048 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 ZNF687Q8N1G0 1237 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 TRAM1L1Q8N609 369 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 DTD2Q96FN9 168 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 IQCGQ9H095 443 aaKnown RBP30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 PCMTD2Q9NV79 361 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 DCDC2Q9UHG0 476 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 ADAM21Q9UKJ8 722 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 FBXL21Q9UKT6 434 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 ITM2BQ9Y287 266 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 CRYL1Q9Y2S2 319 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 VWA7Q9Y334 891 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 PCDHB1Q9Y5F3 818 aa30.84■■■□□ 2.53
CAPNS1-206ENST00000588815 SPAG7O75391 227 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 GSTA1P08263 222 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 F7P08709 466 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 PRSS56P0CW18 603 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 ZNF7P17097 686 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 CD9P21926 228 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 CRHR1P34998 444 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 CDKN1CP49918 316 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 ZNF284Q2VY69 593 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 HENMT1Q5T8I9 393 aaKnown RBP30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 MICALCLQ6ZW33 695 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 USP30Q70CQ3 517 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 SERPINA9Q86WD7 417 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 RBFAQ8N0V3 343 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 NXPE1Q8N323 547 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 FAM96AQ9H5X1 160 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 TLK1Q9UKI8 766 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 FZD4Q9ULV1 537 aa30.83■■■□□ 2.53
CAPNS1-206ENST00000588815 UBA6A0AVT1 1052 aaPredicted RBP30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 GLRA3O75311 464 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 ESR1P03372 595 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 COL6A2P12110 1019 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 RPS3P23396 243 aaKnown RBP eCLIP30.82■■■□□ 2.538e-7■■■■□ 23
CAPNS1-206ENST00000588815 ETV3P41162 512 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 PDE1CQ14123 709 aaPredicted RBP30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 CRY1Q16526 586 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 HECTD2Q5U5R9 776 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 CENPTQ96BT3 561 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 SIPA1Q96FS4 1042 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 AARSD1Q9BTE6 412 aaKnown RBP30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 WRAP53Q9BUR4 548 aaKnown RBP30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 SPATA16Q9BXB7 569 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 POPDC3Q9HBV1 291 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 FBXL12Q9NXK8 326 aa30.82■■■□□ 2.53
CAPNS1-206ENST00000588815 A0A096LPK6 155 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 PLK4O00444 970 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 PRMT5O14744 637 aaPredicted RBP30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 ATG13O75143 517 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 C2P06681 752 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 CHN1P15882 459 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 DBN1Q16643 649 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 RBM20Q5T481 1227 aaKnown RBP30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 CMC1Q7Z7K0 106 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 SLC41A1Q8IVJ1 513 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 DENND1AQ8TEH3 1009 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 ATXN2LQ8WWM7 1075 aaKnown RBP30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 LTB4R2Q9NPC1 389 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 INTS9Q9NV88 658 aaKnown RBP30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 GRID1Q9ULK0 1009 aa30.82■■■□□ 2.52
CAPNS1-206ENST00000588815 A0A1W2PP55 124 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 KANSL1LA0AUZ9 987 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 GOLGA8CPA6NN73 597 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 RNASEH2AO75792 299 aaKnown RBP30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 C6P13671 934 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 MDH1P40925 334 aaKnown RBP30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 SEPT7Q16181 437 aaKnown RBP30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 ATP13A5Q4VNC0 1218 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 RAPH1Q70E73 1250 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 ERLEC1Q96DZ1 483 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 VPS35Q96QK1 796 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 CAB39LQ9H9S4 337 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 POLMQ9NP87 494 aaPredicted RBP30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 ZDHHC3Q9NYG2 299 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 NCKAP1Q9Y2A7 1128 aa30.81■■■□□ 2.52
CAPNS1-206ENST00000588815 A0A087X1B8 175 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 LZTS3O60299 673 aaPredicted RBP30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 PKMP14618 531 aaKnown RBP30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 GM2AP17900 193 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 RPA3P35244 121 aaPredicted RBP30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 GYS2P54840 703 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 TAS2R38P59533 333 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 TAS2R39P59534 338 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 DPTQ07507 201 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 MPP2Q14168 576 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 AGERQ15109 404 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 ZNF549Q6P9A3 640 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 RFLNAQ6ZTI6 216 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 SYT13Q7L8C5 426 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 ACVR1CQ8NER5 493 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 TCP10LQ8TDR4 215 aa30.8■■■□□ 2.52
CAPNS1-206ENST00000588815 HEXDCQ8WVB3 486 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms