RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CYP1A2P05177 515 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 FAM228BP0C875 321 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 PRKAR1AP10644 381 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 SFTPCP11686 197 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 ITGB6P18564 788 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 IL4RP24394 825 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 CD86P42081 329 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 FANCCQ00597 558 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 NIPAL4Q0D2K0 466 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 LRP8Q14114 963 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 GALNT3Q14435 633 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 NR1I3Q14994 352 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 SCARF2Q96GP6 870 aaPredicted RBP13.59□□□□□ -0.23
HDAC5-208ENST00000588419 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
HDAC5-208ENST00000588419 DPYSL5Q9BPU6 564 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 DDA1Q9BW61 102 aa13.59□□□□□ -0.23
HDAC5-208ENST00000588419 BZW2Q9Y6E2 419 aaKnown RBP13.59□□□□□ -0.23
HDAC5-208ENST00000588419 BSNQ9UPA5 3926 aa13.58□□□□□ -0.23
HDAC5-208ENST00000588419 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 DNAJC6O75061 913 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 FASLGP48023 281 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 CSRP3P50461 194 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 RAB15P59190 212 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 TAS2R40P59535 323 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 GBE1Q04446 702 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 IHHQ14623 411 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 FIGNQ5HY92 759 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 ZNF648Q5T619 568 aaPredicted RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 ALKBH5Q6P6C2 394 aaKnown RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 CRTC3Q6UUV7 619 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 KDELC2Q7Z4H8 507 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 SLC9B2Q86UD5 537 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 LRRC49Q8IUZ0 686 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 CCDC13Q8IYE1 715 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 UNC5BQ8IZJ1 945 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 CCHCR1Q8TD31 782 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 MAML1Q92585 1016 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 KIAA1143Q96AT1 154 aaPredicted RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 COX14Q96I36 57 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 TBC1D10AQ9BXI6 508 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 SLC12A9Q9BXP2 914 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 CEP41Q9BYV8 373 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 ASPSCR1Q9BZE9 553 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 B3GNT4Q9C0J1 378 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 SLC25A18Q9H1K4 315 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 GPN2Q9H9Y4 310 aaPredicted RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 TBC1D29Q9UFV1 150 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 PCDHGA3Q9Y5H0 932 aa13.58□□□□□ -0.24
HDAC5-208ENST00000588419 ASH1LQ9NR48 2969 aaKnown RBP13.58□□□□□ -0.24
HDAC5-208ENST00000588419 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 ZNF891A8MT65 544 aaPredicted RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 KCNK1O00180 336 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 PRLP01236 227 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 PIRTP0C851 137 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 SLC2A4P14672 509 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 CCNCP24863 283 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 NOP2P46087 812 aaKnown RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 SPINT3P49223 89 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 ARSEP51690 589 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 POLE2P56282 527 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 UBASH3AP57075 661 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 ZBED6P86452 979 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 IQCB1Q15051 598 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 PCSK7Q16549 785 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 QPCTQ16769 361 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 ZNF569Q5MCW4 686 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 LYSMD3Q7Z3D4 306 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 PHYKPLQ8IUZ5 450 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 NLGN4XQ8N0W4 816 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 NLGN4YQ8NFZ3 816 aaPredicted RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 ARRDC2Q8TBH0 407 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 MLPHQ9BV36 600 aaPredicted RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 BRD8Q9H0E9 1235 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 FAM83DQ9H4H8 585 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 CBX8Q9HC52 389 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 VPS18Q9P253 973 aa13.57□□□□□ -0.24
HDAC5-208ENST00000588419 FLNBO75369 2602 aaKnown RBP13.57□□□□□ -0.24
HDAC5-208ENST00000588419 SYCE3A1L190 88 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 B4E171 279 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 GRID2O43424 1007 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 MTA2O94776 668 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 PROSCO94903 275 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 JCHAINP01591 159 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 MX2P20592 715 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 CES1P23141 567 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 MAN1A1P33908 653 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms