RNA–Protein interactions for RNA: ENST00000588183.5

HDHD2-205, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 1 (best)

Gene HDHD2, Length 2,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-205ENST00000588183 BTN3A1O00481 513 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 VPS26AO75436 327 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 TSPAN12O95859 305 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 C8AP07357 584 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 NCF1P14598 390 aaPredicted RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 ACADSP16219 412 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 CA5AP35218 305 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 PKNOX1P55347 436 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 AP1S1P61966 158 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 SQLEQ14534 574 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 UGT3A2Q3SY77 523 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 BNC2Q6ZN30 1099 aaPredicted RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 RNF111Q6ZNA4 994 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 FBXO39Q8N4B4 442 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 STAG3L4Q8TBR4 150 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 CD200R1Q8TD46 325 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 USP13Q92995 863 aaPredicted RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 C19orf60Q96EN9 201 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 CDRT15Q96T59 188 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 C2orf49Q9BVC5 232 aaPredicted RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 TNKS2Q9H2K2 1166 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 SARS2Q9NP81 518 aaKnown RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 GIMAP2Q9UG22 337 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 TRMT6Q9UJA5 497 aaKnown RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 PRPF19Q9UMS4 504 aaKnown RBP16.6■□□□□ 0.25
HDHD2-205ENST00000588183 PKP3Q9Y446 797 aa16.6■□□□□ 0.25
HDHD2-205ENST00000588183 A0A1B0GTL3 188 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 STX16-NPEPL1H3BU86 382 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 H7C0S8 307 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 PYGLP06737 847 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 THOP1P52888 689 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 ATP6V0D1P61421 351 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 SLC7A9P82251 487 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 AAGABQ6PD74 315 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 HTR3DQ70Z44 454 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 CPNE9Q8IYJ1 553 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 FUBP1Q96AE4 644 aaKnown RBP16.59■□□□□ 0.25
HDHD2-205ENST00000588183 LINGO1Q96FE5 620 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 WDR41Q9HAD4 459 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 TSR3Q9UJK0 312 aaKnown RBP16.59■□□□□ 0.25
HDHD2-205ENST00000588183 MAFFQ9ULX9 164 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 ASB3Q9Y575 518 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
HDHD2-205ENST00000588183 MAP3K7O43318 606 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 LINC00271P0C7V0 271 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 RAG1P15918 1043 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 AGTR2P50052 363 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 ART3Q13508 389 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 FASTKQ14296 549 aaKnown RBP16.58■□□□□ 0.25
HDHD2-205ENST00000588183 GEN1Q17RS7 908 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 RETSATQ6NUM9 610 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 FAM151BQ6UXP7 276 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 CLYBLQ8N0X4 340 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 PGAM4Q8N0Y7 254 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 EEF1AKMT1Q8WVE0 214 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 DNAJC15Q9Y5T4 150 aa16.58■□□□□ 0.25
HDHD2-205ENST00000588183 LAMA2P24043 3122 aaKnown RBP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 LEFTY2O00292 366 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CCL16O15467 120 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 GPC4O75487 556 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CHRM3P20309 590 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 MSX2P35548 267 aaPredicted RBP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CREMQ03060 361 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CACNG1Q06432 222 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 PTK2BQ14289 1009 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 AGKQ53H12 422 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CMPK2Q5EBM0 449 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 LARP4Q71RC2 724 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 NKAPQ8N5F7 415 aaKnown RBP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 RNF148Q8N7C7 305 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 PPFIBP2Q8ND30 876 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 JADE3Q92613 823 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 CORO1BQ9BR76 489 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 EFCAB1Q9HAE3 211 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 MAGEE1Q9HCI5 957 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 SEMA4BQ9NPR2 832 aaPredicted RBP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 INTS6Q9UL03 887 aaKnown RBP16.58■□□□□ 0.24
HDHD2-205ENST00000588183 SCN8AQ9UQD0 1980 aa16.58■□□□□ 0.24
HDHD2-205ENST00000588183 TRAV19A0A0A6YYK7 116 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 PSMD12O00232 456 aaPredicted RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 AZIN1O14977 448 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 PIP5K1BO14986 540 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 PFDN6O15212 129 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 CXCL14O95715 111 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 ALDOCP09972 364 aaKnown RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 HSPA1AP0DMV8 641 aaKnown RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 HSPA1BP0DMV9 641 aaKnown RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 XRCC1P18887 633 aaPredicted RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 CTSOP43234 321 aaPredicted RBP16.57■□□□□ 0.24
HDHD2-205ENST00000588183 HK3P52790 923 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 CLCQ05315 142 aa16.57■□□□□ 0.24
HDHD2-205ENST00000588183 BCL2L1Q07817 233 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms