RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GLIS1Q8NBF1 620 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 NETO2Q8NC67 525 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 CCNYQ8ND76 341 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ZNF548Q8NEK5 533 aaPredicted RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 OR7D4Q8NG98 312 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 OR2A12Q8NGT7 310 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 MAPK15Q8TD08 544 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 NSMCE1Q8WV22 266 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 PRR11Q96HE9 360 aaPredicted RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 BMFQ96LC9 184 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 TSGA13Q96PP4 275 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 DEPDC7Q96QD5 511 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ZYG11BQ9C0D3 744 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ABCG4Q9H172 646 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 SYNDIG1Q9H7V2 258 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 POLR1BQ9H9Y6 1135 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 MPP6Q9NZW5 540 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 KLHL8Q9P2G9 620 aaPredicted RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 LGALS13Q9UHV8 139 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 VPS51Q9UID3 782 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 SLC25A13Q9UJS0 675 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 DMTF1Q9Y222 760 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ITM2BQ9Y287 266 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 IKBKGQ9Y6K9 419 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 KIF26BQ2KJY2 2108 aa7.85□□□□□ -1.15
VMP1-204ENST00000587259 COL27A1Q8IZC6 1860 aaPredicted RBP7.85□□□□□ -1.15
VMP1-204ENST00000587259 NAV2Q8IVL1 2488 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 MUSKO15146 869 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 SLC28A2O43868 658 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 SHOX2O60902 331 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 LEFTY1O75610 366 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 PAK4O96013 591 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 CPP00450 1065 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 CELA2BP08218 269 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 ETS1P14921 441 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 RHOQP17081 205 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 HNRNPA2B1P22626 353 aaKnown RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 CCNCP24863 283 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 AKT2P31751 481 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ETFBP38117 255 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 LSSP48449 732 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 GEMIN4P57678 1058 aaKnown RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 SULT2A1Q06520 285 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 VAC14Q08AM6 782 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ZNF177Q13360 481 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 NAB1Q13506 487 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 KYNUQ16719 465 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ISXQ2M1V0 245 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 RABGAP1LQ5R372 815 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ANKRD20A2Q5SQ80 823 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ARTNQ5T4W7 220 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ANKRD20A1Q5TYW2 823 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ANKRD20A3Q5VUR7 823 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 BROXQ5VW32 411 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ZNF449Q6P9G9 518 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 DPY19L3Q6ZPD9 716 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 EFL1Q7Z2Z2 1120 aaKnown RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 DSG4Q86SJ6 1040 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 LINC00523Q86TU6 105 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 LSM14AQ8ND56 463 aaKnown RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 OR6K2Q8NGY2 324 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 CCDC110Q8TBZ0 833 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 LMX1AQ8TE12 382 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 TLCD1Q96CP7 247 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 ZNF578Q96N58 590 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 CYTH2Q99418 400 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 CAPS2Q9BXY5 557 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 GBA3Q9H227 469 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 VPS37BQ9H9H4 285 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 PREBQ9HCU5 417 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 NLGN3Q9NZ94 848 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 PSMC3IPQ9P2W1 217 aaPredicted RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
VMP1-204ENST00000587259 ENTPD2Q9Y5L3 495 aa7.84□□□□□ -1.15
VMP1-204ENST00000587259 COL6A6A6NMZ7 2263 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 IGLV3-10A0A075B6K4 115 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 IGLON5A6NGN9 336 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ARHGAP42A6NI28 874 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 B8ZZF3 427 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 EFSO43281 561 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 MAGEC1O60732 1142 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 ZNF821O75541 412 aaPredicted RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 ANXA9O76027 345 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 TMEM63AO94886 807 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 RHOCP08134 193 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 C6P13671 934 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 HGFP14210 728 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 MAGEA3P43357 314 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 MMP13P45452 471 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 PDX1P52945 283 aa7.83□□□□□ -1.16
VMP1-204ENST00000587259 YBEYP58557 167 aaPredicted RBP7.83□□□□□ -1.16
VMP1-204ENST00000587259 IFI35P80217 286 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms