RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PDPK2PQ6A1A2 396 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 ENPP7Q6UWV6 458 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 ADAMTSL4Q6UY14 1074 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 TAS2R42Q7RTR8 314 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 NLRP8Q86W28 1048 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 HID1Q8IV36 788 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MINDY1Q8N5J2 469 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 STYXQ8WUJ0 223 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 DCUN1D1Q96GG9 259 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 BMFQ96LC9 184 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 FSCN3Q9NQT6 498 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 IL17CQ9P0M4 197 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 NEU2Q9Y3R4 380 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 A0A1W2PR77 199 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 K7ESM1 405 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 PFDN6O15212 129 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 WNT1P04628 370 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 PROS1P07225 676 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 RALBP11234 206 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 TEAD1P28347 426 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 AKT1P31749 480 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 CCT8P50990 548 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 ITGA8P53708 1063 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 KIAA1024LP59773 190 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 PFN3P60673 137 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 CDK3Q00526 305 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 HIF1AQ16665 826 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 HENMT1Q5T8I9 393 aaKnown RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 ASPMQ8IZT6 3477 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 GABPB2Q8TAK5 448 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 BTN2A2Q8WVV5 523 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 ULK4Q96C45 1275 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 DNAJC1Q96KC8 554 aaKnown RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 RANBP9Q96S59 729 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 CARD6Q9BX69 1037 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 ASB8Q9H765 288 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 ERVMER34-1Q9H9K5 563 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 NLE1Q9NVX2 485 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-215ENST00000584944 WHRNQ9P202 907 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 FKBPLQ9UIM3 349 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
TRAF4-215ENST00000584944 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 CFAP99D6REC4 459 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 LDB2O43679 373 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 AVILO75366 819 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SRP72O76094 671 aaKnown RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 TMEM63AO94886 807 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SEC31AO94979 1220 aaKnown RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 RASGRP1O95267 797 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 TNFP01375 233 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 JUNDP17535 347 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 MC4RP32245 332 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 TRIM23P36406 574 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 CTSKP43235 329 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SRP54P61011 504 aaKnown RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 HNRNPKP61978 463 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 CRADDP78560 199 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 CHRNA6Q15825 494 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 BBS9Q3SYG4 887 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 LDLRAP1Q5SW96 308 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 TSTD2Q5T7W7 516 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 MMGT1Q8N4V1 131 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 OR13C4Q8NGS5 318 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 ZNF398Q8TD17 642 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 GLYATL1Q969I3 302 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 FUBP1Q96AE4 644 aaKnown RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 EID2BQ96D98 161 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 STAMBPL1Q96FJ0 436 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 ELF4Q99607 663 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 C19orf43Q9BQ61 176 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 LRRC1Q9BTT6 524 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 TEX101Q9BY14 249 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
TRAF4-215ENST00000584944 NFKBIL1Q9UBC1 381 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-215ENST00000584944 NEMP2A6NFY4 417 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
TRAF4-215ENST00000584944 C1QTNF9BB2RNN3 333 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms