RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZSWIM9Q86XI8 627 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 RELL1Q8IUW5 271 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 FBXO39Q8N4B4 442 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 LKAAEAR1Q8TD35 194 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ULK4Q96C45 1275 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 LRRC3BQ96PB8 259 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 KIFC1Q9BW19 673 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ACTR5Q9H9F9 607 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 PNPLA8Q9NP80 782 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 AURKCQ9UQB9 309 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 LRRC37A2A6NM11 1700 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 OTOL1A6NHN0 477 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 A8MT66 165 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 G3V2L1 256 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 SMAPO00193 183 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 RPLP2P05387 115 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 LTA4HP09960 611 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 HCAR3P49019 387 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 PRMT2P55345 433 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 POU4F1Q01851 419 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 STARD3Q14849 445 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 MAP7D1Q3KQU3 841 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 MANEALQ5VSG8 457 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 SUGP1Q8IWZ8 645 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 PGBD3Q8N328 593 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 HJURPQ8NCD3 748 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 OR52B6Q8NGF0 335 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 DNAJB14Q8TBM8 379 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 SAP18O00422 153 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 LEFTY1O75610 366 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 F11P03951 625 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 TMEM240Q5SV17 173 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ACAD11Q709F0 780 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ANKRD33Q7Z3H0 272 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 CUZD1Q86UP6 607 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 TRAPPC5Q8IUR0 188 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 FAM20CQ8IXL6 584 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 EID2BQ96D98 161 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 KLF16Q9BXK1 252 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 GEMIN8Q9NWZ8 242 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 ACTL7BQ9Y614 415 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 MYO10Q9HD67 2058 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 SMIM24O75264 130 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 GSNP06396 782 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 EPHX1P07099 455 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 MRPS22P82650 360 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 IL1RL1Q01638 556 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 PPP2R2DQ66LE6 453 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 SZRD1Q7Z422 152 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ZNF276Q8N554 614 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 MAGEH1Q9H213 219 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 IL21Q9HBE4 155 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 FZD3Q9NPG1 666 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 TAS2R13Q9NYV9 303 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 WWOXQ9NZC7 414 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 SCHIP1Q9P0W5 487 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 PLAGL1Q9UM63 463 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 CDYLQ9Y232 598 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 TDRKHQ9Y2W6 561 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 A0A0G2JN53 185 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 CCDC189A1A4V9 331 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 RGSL1A5PLK6 1076 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 LZTS3O60299 673 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 OR4F21O95013 312 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 PRLP01236 227 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 POLR2EP19388 210 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 RPL14P50914 215 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 VPS26BQ4G0F5 336 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 PRAMEF14Q5SWL7 426 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 C4orf22Q6V702 233 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ANKRD46Q86W74 232 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ICA1LQ8NDH6 482 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 BRSK1Q8TDC3 778 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 SLC7A6OSQ96CW6 309 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 SORT1Q99523 831 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ELAC1Q9H777 363 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 TMEM98Q9Y2Y6 226 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 PARNO95453 639 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 GNRH1P01148 92 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 UBTFL6P0CB48 400 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 ZCCHC18P0CG32 403 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 TIE1P35590 1138 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 AIF1P55008 147 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 DIO3P55073 304 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ST8SIA6P61647 398 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 MEF2AQ02078 507 aaPredicted RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 RAB33AQ14088 237 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 KYAT3Q6YP21 454 aaKnown RBP10.22□□□□□ -0.77
RFFL-212ENST00000584655 SH2D5Q6ZV89 423 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 ARCQ7LC44 396 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 C12orf40Q86WS4 652 aa10.22□□□□□ -0.77
RFFL-212ENST00000584655 PSKH2Q96QS6 385 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms