RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SYCE1LA8MT33 242 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 NRG2O14511 850 aaPredicted RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 NEMP1O14524 444 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 CIB2O75838 187 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 TRBC1P01850 177 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 KCNA5P22460 613 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 SP100P23497 879 aaPredicted RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 HERVK_113P63132 956 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 NTHL1P78549 312 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 NAA25Q14CX7 972 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 PDCD2Q16342 344 aaPredicted RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 LSM12Q3MHD2 195 aaKnown RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 ZNF678Q5SXM1 525 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 TAS2R42Q7RTR8 314 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 LYSMD3Q7Z3D4 306 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 CFAP61Q8NHU2 1237 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 KIAA1191Q96A73 305 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 PTERQ96BW5 349 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 SMIM14Q96QK8 99 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 TUBGCP5Q96RT8 1024 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 ERVK-6Q9BXR3 956 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 SHCBP1LQ9BZQ2 653 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 DENND2DQ9H6A0 471 aaPredicted RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 ACSS2Q9NR19 701 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 TBC1D14Q9P2M4 693 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 APPL1Q9UKG1 709 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 MRPS23Q9Y3D9 190 aaKnown RBP22.53■■□□□ 1.2
CCDC47-204ENST00000582252 PCDHB1Q9Y5F3 818 aa22.53■■□□□ 1.2
CCDC47-204ENST00000582252 KERAO60938 352 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 TM7SF2O76062 418 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 CTPS1P17812 591 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 KLF10Q13118 480 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 LYPLAL1Q5VWZ2 237 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 NXNQ6DKJ4 435 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 CUZD1Q86UP6 607 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 CPSF7Q8N684 471 aaKnown RBP22.52■■□□□ 1.2
CCDC47-204ENST00000582252 KCNJ9Q92806 393 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 WDR55Q9H6Y2 383 aaPredicted RBP22.52■■□□□ 1.2
CCDC47-204ENST00000582252 RNPEPL1Q9HAU8 725 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 ZFYVE1Q9HBF4 777 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 TDP1Q9NUW8 608 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 FAM50BQ9Y247 325 aa22.52■■□□□ 1.2
CCDC47-204ENST00000582252 ZNF106Q9H2Y7 1883 aaKnown RBP22.52■■□□□ 1.2
CCDC47-204ENST00000582252 E5RI56 91 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 SUPT7LO94864 414 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 HNRNPLP14866 589 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 EPHA3P29320 983 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 XIAPP98170 497 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 SULT2A1Q06520 285 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 DMC1Q14565 340 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 PAQR3Q6TCH7 311 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 SCUBE1Q8IWY4 988 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 PIANPQ8IYJ0 282 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 CEP70Q8NHQ1 597 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 MAELQ96JY0 434 aaKnown RBP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 LMLNQ96KR4 655 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 BIRC8Q96P09 236 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 GPR21Q99679 349 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 CEP44Q9C0F1 390 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 SMG9Q9H0W8 520 aaKnown RBP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 GSTO2Q9H4Y5 243 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 NOP53Q9NZM5 478 aaKnown RBP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 INTS6Q9UL03 887 aaKnown RBP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 RNF112Q9ULX5 631 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 CLEC4EQ9ULY5 219 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 PLA2G4CQ9UP65 541 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 HS3ST2Q9Y278 367 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 THRAP10827 490 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 SRCP12931 536 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 COX4I1P13073 169 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 OR6K2Q8NGY2 324 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 FAM161BQ96MY7 647 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 ATOH8Q96SQ7 321 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 COLQQ9Y215 455 aaPredicted RBP22.51■■□□□ 1.19
CCDC47-204ENST00000582252 REV3LO60673 3130 aa22.51■■□□□ 1.19
CCDC47-204ENST00000582252 C1orf232A0A0U1RR37 186 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 A0A1W2PQ67 120 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 CAPN8A6NHC0 703 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 PEX11AO75192 247 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 ALPIP09923 528 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 GFAPP14136 432 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 ZNF7P17097 686 aaPredicted RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 ITGALP20701 1170 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 CDKN1CP49918 316 aaPredicted RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 RARS2Q5T160 578 aaKnown RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 NET1Q7Z628 596 aaPredicted RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 PCDH20Q8N6Y1 951 aaKnown RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 PTGR2Q8N8N7 351 aaPredicted RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 EXT2Q93063 718 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 RTKNQ9BST9 563 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 DCLRE1BQ9H816 532 aa22.5■■□□□ 1.19
CCDC47-204ENST00000582252 FNDC3AQ9Y2H6 1198 aaKnown RBP22.5■■□□□ 1.19
CCDC47-204ENST00000582252 PTPN5P54829 565 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 IL2P60568 153 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 OR4D1Q15615 310 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 ANKRD54Q6NXT1 300 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 C22orf39Q6P5X5 142 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 GPR149Q86SP6 731 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 PHTF2Q8N3S3 785 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 POU5F2Q8N7G0 328 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms