RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SQSTM1Q13501 440 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 HENMT1Q5T8I9 393 aaKnown RBP20.78■□□□□ 0.92
CCDC42-203ENST00000581598 ARHGAP40Q5TG30 622 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 INO80CQ6PI98 192 aaPredicted RBP20.78■□□□□ 0.92
CCDC42-203ENST00000581598 DOK6Q6PKX4 331 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 TMPRSS9Q7Z410 1059 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 PIM3Q86V86 326 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 REXO1L1PQ8IX06 675 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC42-203ENST00000581598 LRRN4Q8WUT4 740 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 OLFM3Q96PB7 478 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 WDR24Q96S15 920 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 CMKLR1Q99788 373 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 MLPHQ9BV36 600 aaPredicted RBP20.78■□□□□ 0.92
CCDC42-203ENST00000581598 ADGRE3Q9BY15 652 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 BRD8Q9H0E9 1235 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 TFR2Q9UP52 801 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 TMEM98Q9Y2Y6 226 aa20.78■□□□□ 0.92
CCDC42-203ENST00000581598 C1orf232A0A0U1RR37 186 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 HGFP14210 728 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 ACTR1BP42025 376 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 CD86P42081 329 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 OR1D5P58170 312 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 ACTR1AP61163 376 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 C19orf57Q0VDD7 668 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 KIF5AQ12840 1032 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 ZBTB17Q13105 803 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 PDK1Q15118 436 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 SLC14A2Q15849 920 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 MAP9Q49MG5 647 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 GALNT13Q8IUC8 556 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 CCHCR1Q8TD31 782 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.77■□□□□ 0.92
CCDC42-203ENST00000581598 MAK16Q9BXY0 300 aaKnown RBP20.77■□□□□ 0.92
CCDC42-203ENST00000581598 TSGA10Q9BZW7 698 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 PKD2L2Q9NZM6 624 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 PISDQ9UG56 409 aa20.77■□□□□ 0.92
CCDC42-203ENST00000581598 CNOT6Q9ULM6 557 aaKnown RBP20.77■□□□□ 0.92
CCDC42-203ENST00000581598 APOL1O14791 398 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 HGSO14964 777 aaPredicted RBP20.76■□□□□ 0.91
CCDC42-203ENST00000581598 PPP1R12AO14974 1030 aaPredicted RBP20.76■□□□□ 0.91
CCDC42-203ENST00000581598 DNAJC6O75061 913 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 C1QL1O75973 258 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 FASLGP48023 281 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 TRIM74Q86UV6 250 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 PATE1Q8WXA2 126 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 IMP4Q96G21 291 aaKnown RBP20.76■□□□□ 0.91
CCDC42-203ENST00000581598 DPYSL5Q9BPU6 564 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 SEMA6CQ9H3T2 930 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 FAM83DQ9H4H8 585 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 RMI1Q9H9A7 625 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 DDX56Q9NY93 547 aaKnown RBP20.76■□□□□ 0.91
CCDC42-203ENST00000581598 PLEKHM1Q9Y4G2 1056 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 HEY1Q9Y5J3 304 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 MGAQ8IWI9 3026 aa20.76■□□□□ 0.91
CCDC42-203ENST00000581598 USP27XA6NNY8 438 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 PPM1DO15297 605 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 KRT1P04264 644 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 CD1CP29017 333 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 ALDH4A1P30038 563 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 HADHBP55084 474 aaKnown RBP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 AP1B1Q10567 949 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 TRA2AQ13595 282 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 ZNF574Q6ZN55 896 aaPredicted RBP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 CCDC81Q6ZN84 652 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 JAMLQ86YT9 394 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 RHOT1Q8IXI2 618 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 TADA1Q96BN2 335 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 TRIB3Q96RU7 358 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 CCNL2Q96S94 520 aaPredicted RBP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 AKAP7Q9P0M2 348 aaPredicted RBP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 NFKBIL1Q9UBC1 381 aaPredicted RBP20.75■□□□□ 0.91
CCDC42-203ENST00000581598 TRIM10Q9UDY6 481 aa20.75■□□□□ 0.91
CCDC42-203ENST00000581598 GOLGA6L9A6NEM1 432 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 INPP4BO15327 924 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 KRT86O43790 486 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 PRB1P04280 392 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 LIPCP11150 499 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 ITIH1P19827 911 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 CD82P27701 267 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 BIRC2Q13490 618 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 C16orf72Q14CZ0 275 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 AMZ1Q400G9 498 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 PHF19Q5T6S3 580 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 MARK2Q7KZI7 788 aaKnown RBP20.74■□□□□ 0.91
CCDC42-203ENST00000581598 NT5DC3Q86UY8 548 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 TTC9Q92623 222 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 SLC25A51Q9H1U9 297 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 RDH14Q9HBH5 336 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 MAGEE1Q9HCI5 957 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 OAS3Q9Y6K5 1087 aaKnown RBP20.74■□□□□ 0.91
CCDC42-203ENST00000581598 DUSP10Q9Y6W6 482 aa20.74■□□□□ 0.91
CCDC42-203ENST00000581598 COL6A6A6NMZ7 2263 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 IGHV1OR21-1A0A087WYE8 117 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 FADS2P1A8MWK0 482 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 ASMTLO95671 621 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 ETV5P41161 510 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 LIMK2P53671 638 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 DCDC1P59894 354 aa20.73■□□□□ 0.91
CCDC42-203ENST00000581598 GPLD1P80108 840 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms