RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IL22RA1Q8N6P7 574 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 BMPERQ8N8U9 685 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 OR10G6Q8NH81 332 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 ARRDC2Q8TBH0 407 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 SLC37A2Q8TED4 501 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 BTBD6Q96KE9 485 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 TEFMQ96QE5 360 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 SLC38A3Q99624 504 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 THAP2Q9H0W7 228 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 SARS2Q9NP81 518 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 RBM22Q9NW64 420 aaKnown RBP eCLIP10.52□□□□□ -0.73
RFFL-209ENST00000581265 OCIAD1Q9NX40 245 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 TMEM63CQ9P1W3 806 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 ZNHIT2Q9UHR6 403 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 ANAPC7Q9UJX3 599 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 PILRAQ9UKJ1 303 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 CNOT6Q9ULM6 557 aaKnown RBP10.52□□□□□ -0.73
RFFL-209ENST00000581265 CHKBQ9Y259 395 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 BOD1L1Q8NFC6 3051 aa10.52□□□□□ -0.73
RFFL-209ENST00000581265 TRBV23OR9-2A0A075B6M9 112 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 RGSL1A5PLK6 1076 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 EFCAB7A8K855 629 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 INPP4BO15327 924 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 DUX1O43812 170 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 CLDN7O95471 211 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 ASMTLO95671 621 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 LIFP15018 202 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 MC2RQ01718 297 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 DSC2Q02487 901 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 HHEXQ03014 270 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 DPYSL3Q14195 570 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 IGFBP7Q16270 282 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 IFI16Q16666 785 aaKnown RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 HADHQ16836 314 aaKnown RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 ANKS6Q68DC2 871 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 NCBP2-AS2Q69YL0 99 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 TIGD7Q6NT04 549 aaPredicted RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 CACNA2D3Q8IZS8 1091 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 SH3KBP1Q96B97 665 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 AHCYL2Q96HN2 611 aaKnown RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 SLC45A3Q96JT2 553 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 WDR24Q96S15 920 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 NUP85Q9BW27 656 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 TDRD1Q9BXT4 1180 aaKnown RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 RMI1Q9H9A7 625 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 FBXO8Q9NRD0 319 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 HAUS2Q9NVX0 235 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 TBC1D29Q9UFV1 150 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 TUBD1Q9UJT1 453 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 PCYT1BQ9Y5K3 369 aaPredicted RBP10.51□□□□□ -0.73
RFFL-209ENST00000581265 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
RFFL-209ENST00000581265 A0A087X0T9 212 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 A0A1W2PQJ5 194 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 A6NCN8 305 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 OR5K4A6NMS3 321 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ANKRD66B4E2M5 251 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 MFSD11O43934 449 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 RAD1O60671 282 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 MAP3K6O95382 1288 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 SERPINC1P01008 464 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ATP1A1P05023 1023 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 SERPING1P05155 500 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 FAM228BP0C875 321 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 CA4P22748 312 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 MAP4P27816 1152 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 PBX1P40424 430 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 SPINT3P49223 89 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 EPHA4P54764 986 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 NIPAL4Q0D2K0 466 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 IQCB1Q15051 598 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 PDK2Q15119 407 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 SKIDA1Q1XH10 827 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 TDRD12Q587J7 1177 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 ANKRD20A8PQ5CZ79 823 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 HENMT1Q5T8I9 393 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 ALKBH5Q6P6C2 394 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 CHST15Q7LFX5 561 aaPredicted RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ZNF761Q86XN6 746 aaPredicted RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 FAM129CQ86XR2 697 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
RFFL-209ENST00000581265 KCTD6Q8NC69 237 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 NCSTNQ92542 709 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 RTP4Q96DX8 246 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 CATSPER2Q96P56 530 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 PSMG3-AS1Q96PY0 264 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ZNF670Q9BS34 389 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 ZPBPQ9BS86 351 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 HERPUD2Q9BSE4 406 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 FAM83DQ9H4H8 585 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 PCDH9Q9HC56 1237 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 PRKAB1Q9Y478 270 aa10.5□□□□□ -0.73
RFFL-209ENST00000581265 OAS3Q9Y6K5 1087 aaKnown RBP10.5□□□□□ -0.73
RFFL-209ENST00000581265 ZFC3H1O60293 1989 aaKnown RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 KIR2DS5A0A0G2JLQ3 304 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms