RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 EIF2DP41214 584 aaKnown RBP10.46□□□□□ -0.73
SS18-217ENST00000580958 GRIA2P42262 883 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 IL12RB1P42701 662 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 PTSQ03393 145 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 BST1Q10588 318 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 ARHGEF7Q14155 803 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 AAK1Q2M2I8 961 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 TSNAXIP1Q2TAA8 658 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 CTSL3PQ5NE16 218 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 EGFLAMQ63HQ2 1017 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 ATG16L1Q676U5 607 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 TMEM207Q6UWW9 146 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 SERPINA13PQ6UXR4 307 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 ZCCHC23Q6ZST2 131 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 PARS2Q7L3T8 475 aaKnown RBP10.46□□□□□ -0.73
SS18-217ENST00000580958 SPATA21Q7Z572 469 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 SNX20Q7Z614 316 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 SPATA6LQ8N4H0 392 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 GPR26Q8NDV2 337 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 PPP1R14CQ8TAE6 165 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 RAB3IL1Q8TBN0 382 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 PIP4K2CQ8TBX8 421 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 CSGALNACT1Q8TDX6 532 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 OR8D1Q8WZ84 308 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 FAM136AQ96C01 138 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 GRAMD1AQ96CP6 724 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 THOC1Q96FV9 657 aaKnown RBP10.46□□□□□ -0.73
SS18-217ENST00000580958 FAM161BQ96MY7 647 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 C19orf43Q9BQ61 176 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 IL26Q9NPH9 171 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 CPSF2Q9P2I0 782 aaKnown RBP10.46□□□□□ -0.73
SS18-217ENST00000580958 THAP10Q9P2Z0 257 aaPredicted RBP10.46□□□□□ -0.73
SS18-217ENST00000580958 COPG2Q9UBF2 871 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 XPR1Q9UBH6 696 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 MID2Q9UJV3 735 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 APPL1Q9UKG1 709 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 SARDHQ9UL12 918 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 STARD13Q9Y3M8 1113 aa10.46□□□□□ -0.73
SS18-217ENST00000580958 TRPM6Q9BX84 2022 aa10.46□□□□□ -0.74
SS18-217ENST00000580958 F5P12259 2224 aa10.46□□□□□ -0.74
SS18-217ENST00000580958 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ANHXE9PGG2 379 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 G3V2L1 256 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 EBAG9O00559 213 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 NIPSNAP2O75323 286 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 PRNPP04156 253 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 SBK3P0C264 359 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 MYL2P10916 166 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 UGT1A6P19224 532 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 UGT1A1P22309 533 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 UGT1A4P22310 534 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 NFKBIAP25963 317 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 UGT1A3P35503 534 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 UGT1A5P35504 534 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 PTGER3P43115 390 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 SPINT3P49223 89 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 GALK1P51570 392 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 SUOXP51687 545 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 KPNA2P52292 529 aaKnown RBP10.45□□□□□ -0.74
SS18-217ENST00000580958 METAP1P53582 386 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 PTPN5P54829 565 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 OVGP1Q12889 678 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 RALGDSQ12967 914 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 STX3Q13277 289 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ITGA9Q13797 1035 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 TECRLQ5HYJ1 363 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 DPPA4Q7L190 304 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 HSD11B1LQ7Z5J1 315 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 CCDC91Q7Z6B0 441 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 TTC7BQ86TV6 843 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 FSTL5Q8N475 847 aaPredicted RBP10.45□□□□□ -0.74
SS18-217ENST00000580958 TMIEQ8NEW7 156 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ZNF398Q8TD17 642 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 HCAR2Q8TDS4 363 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ANKRD49Q8WVL7 239 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ERLEC1Q96DZ1 483 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 CCDC97Q96F63 343 aaPredicted RBP10.45□□□□□ -0.74
SS18-217ENST00000580958 BIRC8Q96P09 236 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ACOX2Q99424 681 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 GPR21Q99679 349 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 TMEM245Q9H330 911 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
SS18-217ENST00000580958 POPDC3Q9HBV1 291 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 FBRSL1Q9HCM7 1045 aaKnown RBP10.45□□□□□ -0.74
SS18-217ENST00000580958 CACNA2D2Q9NY47 1150 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 PKD2L2Q9NZM6 624 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 CRLS1Q9UJA2 301 aa10.45□□□□□ -0.74
SS18-217ENST00000580958 A0A1W2PPC1 479 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 C2CD4DB7Z1M9 353 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 PLK4O00444 970 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 SOX1O00570 391 aaPredicted RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 VPS26AO75436 327 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 LYPLA1O75608 230 aaPredicted RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 IL1BP01584 269 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 SERPINE1P05121 402 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 RALBP11234 206 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 ZNF30P17039 623 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms