RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MIR1-1HGQ9H1L0 117 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 WDR26Q9H7D7 661 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 VPS37BQ9H9H4 285 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 CATSPERZQ9NTU4 200 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
SKA2-205ENST00000580541 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 CRLS1Q9UJA2 301 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 LRRK1Q38SD2 2015 aa14.2□□□□□ -0.14
SKA2-205ENST00000580541 DOCK9Q9BZ29 2069 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 ZCWPW2A0A1B0GU75 182 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 CCDC162PA2VCL2 907 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 CFAP99D6REC4 459 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 BCAT2O15382 392 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 CD3EAPO15446 510 aaKnown RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 BANF1O75531 89 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 SLC25A14O95258 325 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 GOT2P00505 430 aaKnown RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 GM2AP17900 193 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 CD38P28907 300 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 THOP1P52888 689 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 XIAPP98170 497 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 PTPRCAPQ14761 206 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 IRF4Q15306 451 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 RNF187Q5TA31 235 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 PTAR1Q7Z6K3 402 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 KCNMB4Q86W47 210 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 SYT12Q8IV01 421 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 SLC41A1Q8IVJ1 513 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 IGDCC3Q8IVU1 814 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 AGGF1Q8N302 714 aaeCLIP14.19□□□□□ -0.14
SKA2-205ENST00000580541 TMEM145Q8NBT3 493 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 GPR150Q8NGU9 434 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 GDAP1Q8TB36 358 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 GLYATL1Q969I3 302 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 DCUN1D1Q96GG9 259 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 FCRL3Q96P31 734 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 KLF6Q99612 283 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 APOOQ9BUR5 198 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 SUDS3Q9H7L9 328 aaPredicted RBP14.19□□□□□ -0.14
SKA2-205ENST00000580541 LRRC4CQ9HCJ2 640 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 SMOXQ9NWM0 555 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 TXNDC16Q9P2K2 825 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 CUL9Q8IWT3 2517 aa14.19□□□□□ -0.14
SKA2-205ENST00000580541 A0A1B0GTW7 788 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 CCDC151A5D8V7 595 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 GPR89AB7ZAQ6 455 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 GPR89BP0CG08 455 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 ARCN1P48444 511 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 ARSDP51689 593 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 MGAT5Q09328 741 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 SRSF5Q13243 272 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 PEX6Q13608 980 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 KYNUQ16719 465 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 ATP13A5Q4VNC0 1218 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 KYAT3Q6YP21 454 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 RFLNAQ6ZTI6 216 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 KIAA0408Q6ZU52 694 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 ABI3BPQ7Z7G0 1075 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 CERS2Q96G23 380 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 TEX101Q9BY14 249 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 TRIM39Q9HCM9 518 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 MBNL1Q9NR56 388 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 MOCS1Q9NZB8 636 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 ZFATQ9P243 1243 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 PCDHGA5Q9Y5G8 931 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.18□□□□□ -0.14
SKA2-205ENST00000580541 SDK1Q7Z5N4 2213 aa14.18□□□□□ -0.14
SKA2-205ENST00000580541 A0A087WUV0 522 aaPredicted RBP14.17□□□□□ -0.14
SKA2-205ENST00000580541 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 QSOX1O00391 747 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 RAD51BO15315 384 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 VEGFDO43915 354 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A9O60656 530 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 NDUFS3O75489 264 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 FAM153BP0C7A2 387 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 MYCLP1P12525 358 aaPredicted RBP14.17□□□□□ -0.14
SKA2-205ENST00000580541 ZNF7P17097 686 aaPredicted RBP14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A6P19224 532 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 MSH3P20585 1137 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 OGNP20774 298 aaKnown RBP14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A1P22309 533 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A4P22310 534 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 SSTR1P30872 391 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A3P35503 534 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 UGT1A5P35504 534 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 PTGER3P43115 390 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 C21orf59P57076 290 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 PFN3P60673 137 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 CDK3Q00526 305 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 NAB1Q13506 487 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 GTF2H3Q13889 308 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 ITIH4Q14624 930 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 FAM153CQ494X1 144 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 HSP90AA5PQ58FG0 334 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 Q6ZSR6 202 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 ARMCX6Q7L4S7 300 aa14.17□□□□□ -0.14
SKA2-205ENST00000580541 HEATR4Q86WZ0 1026 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms