RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 C16orf89Q6UX73 402 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RPTNQ6XPR3 784 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 STK32CQ86UX6 486 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LSMEM2Q8N112 164 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RIBC1Q8N443 379 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C2orf73Q8N5S3 287 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UBR7Q8N806 425 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 FNDC5Q8NAU1 212 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2T3Q8NH03 318 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RPLP0P6Q8NHW5 317 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TRPC4APQ8TEL6 797 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 DCAKDQ8WVC6 231 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GFM2Q969S9 779 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GRAMD1AQ96CP6 724 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PHF21BQ96EK2 531 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MOCOSQ96EN8 888 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 THOC1Q96FV9 657 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LRIG1Q96JA1 1093 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SPATA13Q96N96 652 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2M4Q96R27 311 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SNRNP25Q9BV90 132 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MYLK2Q9H1R3 596 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 FZD8Q9H461 694 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 METTL7AQ9H8H3 244 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 AGO3Q9H9G7 860 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CDHR5Q9HBB8 845 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM27Q9HBJ8 222 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NGBQ9NPG2 151 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM9BQ9NQ34 198 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 THSD1Q9NS62 852 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 KLRF1Q9NZS2 232 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 EIF2B4Q9UI10 523 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SCOCQ9UIL1 159 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CNTRLQ7Z7A1 2325 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1W2PQU0 124 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 A8MUA0 341 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 APOC4-APOC2K7ER74 178 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FCHO1O14526 889 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 XKRYO14609 159 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TNFRSF10BO14763 440 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 EIF3HO15372 352 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AKAP10O43572 662 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PDE9AO76083 593 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 USP1O94782 785 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 EPN2O95208 641 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SNX4O95219 450 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ITGBL1O95965 494 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PAK4O96013 591 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 APOC2P02655 101 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF30P17039 623 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PFKLP17858 780 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NR1D1P20393 614 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MGAT1P26572 445 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NUP62P37198 522 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCNKAP51800 687 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PNLIPRP1P54315 467 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC12A3P55017 1021 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 IL10RBQ08334 325 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NFYCQ13952 458 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RRP1BQ14684 758 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DHCR24Q15392 516 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC26Q2I0M4 334 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CCNYL2Q5T2Q4 361 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KIAA0319Q5VV43 1072 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RTL4Q6ZR62 310 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FGD2Q7Z6J4 655 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TMPRSS11BQ86T26 416 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MIER2Q8N344 545 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZMIZ2Q8NF64 920 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM81AQ8TBF8 368 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 IPCEF1Q8WWN9 437 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TOP1MTQ969P6 601 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNK16Q96T55 309 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MCMBPQ9BTE3 642 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZSCAN5AQ9BUG6 496 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 GLOD4Q9HC38 313 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MID1IP1Q9NPA3 183 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TIGARQ9NQ88 270 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 HRASLS2Q9NWW9 162 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 GEMIN8Q9NWZ8 242 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 GLS2Q9UI32 602 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DKKL1Q9UK85 242 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ACAD8Q9UKU7 415 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC6A14Q9UN76 642 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PLAGL2Q9UPG8 496 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC9A8Q9Y2E8 581 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AP3M1Q9Y2T2 418 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MFHAS1Q9Y4C4 1052 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 USP15Q9Y4E8 981 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LAMB2P55268 1798 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A087X1B8 175 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AGPSO00116 658 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RFXAPO00287 272 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MAGEB3O15480 346 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MT-CYBP00156 380 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RARAP10276 462 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LAMP2P13473 410 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CPA3P15088 417 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DRD4P21917 467 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms