RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 COX14Q96I36 57 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 NSMCE3Q96MG7 304 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 ZNF830Q96NB3 372 aaPredicted RBP14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 RIOK2Q9BVS4 552 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 PCDH18Q9HCL0 1135 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 RAD18Q9NS91 495 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 KCTD3Q9Y597 815 aa14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 BZW2Q9Y6E2 419 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-205ENST00000577686 TRBV23OR9-2A0A075B6M9 112 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 LILRA5A6NI73 299 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 A8MU76 341 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 GPR89AB7ZAQ6 455 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.162e-9■■■□□ 16.7
SMARCD2-205ENST00000577686 MATN3O15232 486 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 FZD6O60353 706 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 STK17BO94768 372 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 MTA2O94776 668 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 SOD1P00441 154 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 GPR89BP0CG08 455 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 F3P13726 295 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 TCN2P20062 427 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PTSQ03393 145 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 NFATC2Q13469 925 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 LACTB2Q53H82 288 aaPredicted RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ANKRD20A8PQ5CZ79 823 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 CCDC183Q5T5S1 534 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ALG1LQ6GMV1 187 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ARHGAP22Q7Z5H3 698 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 TRIM48Q8IWZ4 208 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 BMPERQ8N8U9 685 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PTCD2Q8WV60 388 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 STARD8Q92502 1023 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 FATE1Q969F0 183 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PMEPA1Q969W9 287 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 TDRD1Q9BXT4 1180 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 EPN3Q9H201 632 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 CARD9Q9H257 536 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 FAM83DQ9H4H8 585 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PCDH9Q9HC56 1237 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ETNK2Q9NVF9 386 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 RBM22Q9NW64 420 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 TMEM9Q9P0T7 183 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 ANAPC7Q9UJX3 599 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 TMEM184BQ9Y519 407 aaPredicted RBP14.08□□□□□ -0.16
SMARCD2-205ENST00000577686 MAST4O15021 2626 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 C1orf232A0A0U1RR37 186 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 MYO1FO00160 1098 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 SNX2O60749 519 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 PDHA1P08559 390 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ANKRD34CP0C6C1 535 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ACP5P13686 325 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 IL1R2P27930 398 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 GARSP41250 739 aaKnown RBP14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ARSDP51689 593 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 GALNT2Q10471 571 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 UBAP2LQ14157 1087 aaKnown RBP14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 IYDQ6PHW0 289 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ATCAYQ86WG3 371 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ZNF761Q86XN6 746 aaPredicted RBP14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 LYSMD1Q96S90 227 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 CTRCQ99895 268 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ANKMY1Q9P2S6 941 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 ST14Q9Y5Y6 855 aa14.07□□□□□ -0.16
SMARCD2-205ENST00000577686 MKRN2OSH3BPM6 223 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 TOX3O15405 576 aaPredicted RBP14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 NKX2-8O15522 239 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 GRID2O43424 1007 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 DNAJC6O75061 913 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 CCNCP24863 283 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 CLCNKAP51800 687 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 TPM4P67936 248 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 FOXK1P85037 733 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 NCAPHQ15003 741 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 PDK2Q15119 407 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 ZNF569Q5MCW4 686 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 MAML1Q92585 1016 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 BPIFA3Q9BQP9 254 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 ANP32EQ9BTT0 268 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 MLPHQ9BV36 600 aaPredicted RBP14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 OSGEPL1Q9H4B0 414 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 CPNE7Q9UBL6 633 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 TBC1D29Q9UFV1 150 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 KLHL3Q9UH77 587 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 KCND3Q9UK17 655 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 KCNK6Q9Y257 313 aa14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 MN1Q10571 1320 aaPredicted RBP14.06□□□□□ -0.16
SMARCD2-205ENST00000577686 HECTD1Q9ULT8 2610 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms