RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 WDR83Q9BRX9 315 aaKnown RBP16.97■□□□□ 0.31
NUP88-210ENST00000574867 APOOQ9BUR5 198 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 ANKZF1Q9H8Y5 726 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 OR1A2Q9Y585 309 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 PROB1E7EW31 1015 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 HTR1BP28222 390 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 THOP1P52888 689 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 C21orf59P57076 290 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 CACNG1Q06432 222 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 PTK2BQ14289 1009 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 CRYMQ14894 314 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 ATP13A5Q4VNC0 1218 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 CCDC25Q86WR0 208 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP88-210ENST00000574867 ZNF398Q8TD17 642 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 GLYATL1Q969I3 302 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP88-210ENST00000574867 ARRDC1-AS1Q9H2J1 176 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 ASB8Q9H765 288 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 ZCWPW2A0A1B0GU75 182 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 CCDC162PA2VCL2 907 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 AGAP14A8MT82 685 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 GOT2P00505 430 aaKnown RBP16.96■□□□□ 0.31
NUP88-210ENST00000574867 WNT1P04628 370 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 KELP23276 732 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 NFATC4Q14934 902 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 FASTKD3Q14CZ7 662 aaKnown RBP16.96■□□□□ 0.31
NUP88-210ENST00000574867 STEAP4Q687X5 459 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 CES3Q6UWW8 571 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 MACC1Q6ZN28 852 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 IGDCC3Q8IVU1 814 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 OR6P1Q8NGX9 317 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 PYROXD1Q8WU10 500 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUP88-210ENST00000574867 FUBP1Q96AE4 644 aaKnown RBP16.96■□□□□ 0.31
NUP88-210ENST00000574867 COX14Q96I36 57 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 SUDS3Q9H7L9 328 aaPredicted RBP16.96■□□□□ 0.31
NUP88-210ENST00000574867 CRLS1Q9UJA2 301 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 FAM169AQ9Y6X4 670 aa16.96■□□□□ 0.31
NUP88-210ENST00000574867 TP53BP1Q12888 1972 aaPredicted RBP16.96■□□□□ 0.31
NUP88-210ENST00000574867 SDK1Q7Z5N4 2213 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 TLR4O00206 839 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 CSNK1EP49674 416 aaKnown RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 PDE1CQ14123 709 aaPredicted RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 LONRF1Q17RB8 773 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 ZRANB3Q5FWF4 1079 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 HP1BP3Q5SSJ5 553 aaPredicted RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 KDM7AQ6ZMT4 941 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 RELL1Q8IUW5 271 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 ANKMY2Q8IV38 441 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 OR4L1Q8NH43 312 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 TRBV5-4A0A0C4DH59 114 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 INPP4BO15327 924 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 VAPBO95292 243 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 CFIP05156 583 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 MCM3P25205 808 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 FOXN2P32314 431 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 ARCN1P48444 511 aaKnown RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 NXPH1P58417 271 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 AARS2Q5JTZ9 985 aaKnown RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 PLA2G2CQ5R387 149 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 LDLRAP1Q5SW96 308 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 LAYNQ6UX15 382 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 UNC5AQ6ZN44 842 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 SLC22A18ASQ8N1D0 253 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 DDHD1Q8NEL9 900 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 CFAP36Q96G28 342 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 WDR92Q96MX6 357 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 FCRL3Q96P31 734 aaPredicted RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 CAPN10Q9HC96 672 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 CATSPERZQ9NTU4 200 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 CNOT6Q9ULM6 557 aaKnown RBP16.95■□□□□ 0.3
NUP88-210ENST00000574867 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 PLXNB3Q9ULL4 1909 aa16.95■□□□□ 0.3
NUP88-210ENST00000574867 SPTY2D1-AS1A0A0U1RR47 76 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A9O60656 530 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 LRP3O75074 770 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 SLC25A14O95258 325 aaPredicted RBP16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A6P19224 532 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A1P22309 533 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A4P22310 534 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 ARNTP27540 789 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A3P35503 534 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 UGT1A5P35504 534 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 MAGEA4P43358 317 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 NHLH1Q02575 133 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 FRG1Q14331 258 aaKnown RBP16.94■□□□□ 0.3
NUP88-210ENST00000574867 FASTKD1Q53R41 847 aaKnown RBP16.94■□□□□ 0.3
NUP88-210ENST00000574867 TRIM61Q5EBN2 209 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 LMNTD2Q8IXW0 634 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 NXPE1Q8N323 547 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 GABPB2Q8TAK5 448 aaPredicted RBP16.94■□□□□ 0.3
NUP88-210ENST00000574867 TTC1Q99614 292 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 LGR4Q9BXB1 951 aa16.94■□□□□ 0.3
NUP88-210ENST00000574867 ZCCHC2Q9C0B9 1178 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms