RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TBC1D3Q8IZP1 549 aaPredicted RBP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 TPSD1Q9BZJ3 242 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 CDH19Q9H159 772 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 PREBQ9HCU5 417 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 CRLS1Q9UJA2 301 aa23.89■■□□□ 1.42
ATPAF1-213ENST00000574428 IQANK1A0A1B0GTG1 560 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 A0A1W2PQU0 124 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TM7SF2O76062 418 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 APBB3O95704 486 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 ITGA2BP08514 1039 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 KRT15P19012 456 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 SPRP35270 261 aaPredicted RBP23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 CD151P48509 253 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 LIMK2P53671 638 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TAOK1Q7L7X3 1001 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 RAVER1Q8IY67 606 aaKnown RBP23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 PELI3Q8N2H9 469 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 KLK6Q92876 244 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 VPS39Q96JC1 886 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 RHOJQ9H4E5 214 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 CYP8B1Q9UNU6 501 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 CRYL1Q9Y2S2 319 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 NUMA1Q14980 2115 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TRBV5-4A0A0C4DH59 114 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TRIM49D1C9J1S8 452 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 KRT37O76014 449 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 KRT38O76015 456 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TTPAP49638 278 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 PPP2CBP62714 309 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 RPS21P63220 83 aaKnown RBP23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 PPP2CAP67775 309 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TERF2Q15554 542 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 DBN1Q16643 649 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 GPR33Q49SQ1 333 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 KIAA1161Q6NSJ0 714 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 GALNT7Q86SF2 657 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 TRAM1L1Q8N609 369 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 ACVR1CQ8NER5 493 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 MZB1Q8WU39 189 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 CCDC97Q96F63 343 aaPredicted RBP23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 ZSCAN5AQ9BUG6 496 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 BTBD1Q9H0C5 482 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 DLGAP2Q9P1A6 1054 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 ADAM21Q9UKJ8 722 aa23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 MTO1Q9Y2Z2 717 aaKnown RBP23.88■■□□□ 1.41
ATPAF1-213ENST00000574428 BDP1A6H8Y1 2624 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 FADS2P1A8MWK0 482 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 NDUFS3O75489 264 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 SNRPAP09012 282 aaKnown RBP23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 ITGA9Q13797 1035 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 TMEM259Q4ZIN3 620 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 LGSNQ5TDP6 509 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 ZNF765Q7L2R6 523 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 NXPE1Q8N323 547 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 LPGAT1Q92604 370 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 ATP6V1G3Q96LB4 118 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 TCF12Q99081 682 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 INTS10Q9NVR2 710 aaKnown RBP23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 TMPRSS11EQ9UL52 423 aa23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 NOVA2Q9UNW9 492 aaKnown RBP23.87■■□□□ 1.41
ATPAF1-213ENST00000574428 UBA6A0AVT1 1052 aaPredicted RBP23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 AGAP14A8MT82 685 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 K7ESM1 405 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 OR1I1O60431 355 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 IGLV3-19P01714 112 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 ACRV1P26436 265 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 CNTFP26441 200 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 MAT2AP31153 395 aaKnown RBP23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 FGL2Q14314 439 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 SETMARQ53H47 684 aaPredicted RBP23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 AGBL2Q5U5Z8 902 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 HORMAD1Q86X24 394 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 NDNQ99608 321 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 A0A1W2PPM1 405 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 CXCL12P48061 93 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 TNFAIP8L3Q5GJ75 292 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 RNF187Q5TA31 235 aaPredicted RBP23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 CERS6Q6ZMG9 384 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 DCLK2Q8N568 766 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 GPATCH11Q8N954 259 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 DTX3LQ8TDB6 740 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 RLN3Q8WXF3 142 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 C1QTNF2Q9BXJ5 285 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 KDM4CQ9H3R0 1056 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 SGK2Q9HBY8 427 aa23.86■■□□□ 1.41
ATPAF1-213ENST00000574428 SOD1P00441 154 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 DPTQ07507 201 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 RBM20Q5T481 1227 aaKnown RBP23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 RAET1GQ6H3X3 334 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 NEK5Q6P3R8 708 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 SRRM1Q8IYB3 904 aaKnown RBP23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 FRMD1Q8N878 549 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 OR2T34Q8NGX1 318 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 NAT14Q8WUY8 206 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 SCG3Q8WXD2 468 aaKnown RBP23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 TLCD1Q96CP7 247 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 GPR22Q99680 433 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 IER2Q9BTL4 223 aa23.85■■□□□ 1.41
ATPAF1-213ENST00000574428 BOCQ9BWV1 1114 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms