RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 SRPK3Q9UPE1 567 aa12.16□□□□□ -0.46
SMIM28-201ENST00000573100 PRKAB1Q9Y478 270 aa12.16□□□□□ -0.46
SMIM28-201ENST00000573100 SHANK1Q9Y566 2161 aa12.16□□□□□ -0.46
SMIM28-201ENST00000573100 MN1Q10571 1320 aaPredicted RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 CSMD1Q96PZ7 3565 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 KIR2DS5A0A0G2JLQ3 304 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 A0A0G2JNG1 304 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 KIR2DS3K7RE56 304 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 TOX3O15405 576 aaPredicted RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SNX2O60749 519 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SORBS2O94875 1100 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 MT-ND3P03897 115 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SLC2A4P14672 509 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 DESP17661 470 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 CTPS1P17812 591 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 ERCC2P18074 760 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 TNFAIP3P21580 790 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 HSPA9P38646 679 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SEPHS1P49903 392 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 GFERP55789 205 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SH3BP2P78314 561 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 ZNF235Q14590 738 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 KIR2DS5Q14953 304 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 USP45Q70EL2 814 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 TICAM1Q8IUC6 712 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 SEC14L1Q92503 715 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 COX14Q96I36 57 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 MCEEQ96PE7 176 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 NUDCD1Q96RS6 583 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 AGAP2Q99490 1192 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 DHX35Q9H5Z1 703 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 RCOR3Q9P2K3 495 aaPredicted RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 CPNE7Q9UBL6 633 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 AP4E1Q9UPM8 1137 aa12.15□□□□□ -0.46
SMIM28-201ENST00000573100 PCDHGA9Q9Y5G4 932 aaKnown RBP12.15□□□□□ -0.46
SMIM28-201ENST00000573100 A0A0U1RQS6 177 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 TCRBV5S1A1TA0A578 114 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 A6NCN8 305 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 WIPF3A6NGB9 483 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 C21orf140B9A014 251 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 DNAJC6O75061 913 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 SPAG6O75602 509 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 PGLSO95336 258 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 CLDN1O95832 211 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 C9P02748 559 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 FGF5P12034 268 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 F3P13726 295 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 VARSP26640 1264 aaKnown RBP12.14□□□□□ -0.47
SMIM28-201ENST00000573100 TNFRSF8P28908 595 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 SOX5P35711 763 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 CCL11P51671 97 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 PTSQ03393 145 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 TRAF2Q12933 501 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 MRPL49Q13405 166 aaKnown RBP12.14□□□□□ -0.47
SMIM28-201ENST00000573100 CA9Q16790 459 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 HSP90AA4PQ58FG1 418 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 ARMC12Q5T9G4 340 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 DCUN1D2Q6PH85 259 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 NDUFAF2Q8N183 169 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 NPWQ8N729 165 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 THAP4Q8WY91 577 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 RIOK2Q9BVS4 552 aaKnown RBP12.14□□□□□ -0.47
SMIM28-201ENST00000573100 SLC29A3Q9BZD2 475 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 MLXIPLQ9NP71 852 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 VPS18Q9P253 973 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 KCNK6Q9Y257 313 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 PPIL1Q9Y3C6 166 aa12.14□□□□□ -0.47
SMIM28-201ENST00000573100 PCYT1BQ9Y5K3 369 aaPredicted RBP12.14□□□□□ -0.47
SMIM28-201ENST00000573100 SETD2Q9BYW2 2564 aaPredicted RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 TNRC6AQ8NDV7 1962 aaKnown RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 LILRA5A6NI73 299 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 LRCH4O75427 683 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 RASSF9O75901 435 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 ATP1A1P05023 1023 aaKnown RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 ACP5P13686 325 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 TYRP1P17643 537 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 AMD1P17707 334 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 ELAVL4P26378 380 aaKnown RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 CAMK4Q16566 473 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 LRRC66Q68CR7 880 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 TP53INP2Q8IXH6 220 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 SRRM1Q8IYB3 904 aaKnown RBP12.13□□□□□ -0.47
SMIM28-201ENST00000573100 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
SMIM28-201ENST00000573100 PGBD5Q8N414 524 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms