RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PTK2BQ14289 1009 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 CRYMQ14894 314 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 SLMAPQ14BN4 828 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 FASTKD3Q14CZ7 662 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 LONRF1Q17RB8 773 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR33Q49SQ1 333 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 ATP13A5Q4VNC0 1218 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 AARS2Q5JTZ9 985 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 KIAA0930Q6ICG6 404 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 DOK6Q6PKX4 331 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 LAYNQ6UX15 382 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 ADAMTSL4Q6UY14 1074 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 UNC5AQ6ZN44 842 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 TMEM135Q86UB9 458 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 PHYKPLQ8IUZ5 450 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 IGDCC3Q8IVU1 814 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 EIF1ADQ8N9N8 165 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 OR4L1Q8NH43 312 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 GABPB2Q8TAK5 448 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 CEP76Q8TAP6 659 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 GSDMBQ8TAX9 411 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 DTX3LQ8TDB6 740 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 GLYATL1Q969I3 302 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 DCUN1D1Q96GG9 259 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 HIC2Q96JB3 615 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 BMFQ96LC9 184 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 FCRL3Q96P31 734 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 APOOQ9BUR5 198 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 ARRDC1-AS1Q9H2J1 176 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 FAM96AQ9H5X1 160 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 VPS37BQ9H9H4 285 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 UGT1A7Q9HAW7 530 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 UGT1A10Q9HAW8 530 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 UGT1A8Q9HAW9 530 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 CATSPERZQ9NTU4 200 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 TMEM74BQ9NUR3 256 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 MOSPD1Q9UJG1 213 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 PCDHGA5Q9Y5G8 931 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
NPLOC4-208ENST00000572351 A0A0C4DFX4 3053 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 A0A1B0GVT2 93 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 GOLGA8KD6RF30 607 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 GOLGA8TH3BQL2 631 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TLR4O00206 839 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 VILLO15195 856 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 CD3EAPO15446 510 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR39O43194 453 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 SOD1P00441 154 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TUBBP07437 444 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 RETP07949 1114 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 RALBP11234 206 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 MSH3P20585 1137 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TEAD1P28347 426 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TNFRSF8P28908 595 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 PHBP35232 272 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 PPARGP37231 505 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 NBL1P41271 181 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 CSNK1EP49674 416 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 PFN3P60673 137 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 VSNL1P62760 191 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 XIAPP98170 497 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 PEX6Q13608 980 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 NFATC4Q14934 902 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 DUOXA1Q1HG43 343 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 LDLRAP1Q5SW96 308 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 LYPLAL1Q5VWZ2 237 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 ZNF470Q6ECI4 717 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 NEPROQ6NW34 567 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 ENPP7Q6UWV6 458 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 KDM7AQ6ZMT4 941 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 SDCCAG8Q86SQ7 713 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 IQCHQ86VS3 1027 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 KCNMB4Q86W47 210 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 PELI3Q8N2H9 469 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 OR13H1Q8NG92 308 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 BTN2A2Q8WVV5 523 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 CDKL2Q92772 493 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 FUBP1Q96AE4 644 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 WDR92Q96MX6 357 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TTC25Q96NG3 672 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 VPS35Q96QK1 796 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 COPS8Q99627 209 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 FAM167BQ9BTA0 163 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 TEX101Q9BY14 249 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 ZCCHC2Q9C0B9 1178 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 ARFGAP3Q9NP61 516 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 SMOXQ9NWM0 555 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 IL1RAPL1Q9NZN1 696 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 NCDNQ9UBB6 729 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 FAM169AQ9Y6X4 670 aa9.37□□□□□ -0.91
NPLOC4-208ENST00000572351 SHROOM3Q8TF72 1996 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms