RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GTF3C1Q12789 2109 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 A0A0D9SEW6 157 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 CCDC78A2IDD5 438 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 TNFRSF10CO14798 259 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 SPRY1O43609 319 aaPredicted RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 CLDN11O75508 207 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 TNFRSF21O75509 655 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 WISP2O76076 250 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 ADCY5O95622 1261 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 UGT2B4P06133 528 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 AGAP20933 346 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 KELP23276 732 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 DNASE1P24855 282 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 SYKP43405 635 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 MAPK9P45984 424 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 ZNF165P49910 485 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 DGKQP52824 942 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 ILF3Q12906 894 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD3-213ENST00000571249 CDC16Q13042 620 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 MTM1Q13496 603 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 ATP1A4Q13733 1029 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 LONRF1Q17RB8 773 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 RRAGBQ5VZM2 374 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 MTFR2Q6P444 385 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 SARM1Q6SZW1 724 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 GFRALQ6UXV0 394 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 KRBA2Q6ZNG9 492 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 C16orf47Q6ZP98 133 aaPredicted RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 CCDC65Q8IXS2 484 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 PCDH20Q8N6Y1 951 aaKnown RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 ZNF507Q8TCN5 953 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 EPSTI1Q96J88 318 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 KLHL32Q96NJ5 620 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 ZNF559Q9BR84 538 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 TRIM56Q9BRZ2 755 aaKnown RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 TM6SF2Q9BZW4 377 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 PHACTR1Q9C0D0 580 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 MIS12Q9H081 205 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 CISHQ9NSE2 258 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 DNAJB12Q9NXW2 375 aaKnown RBP6.86□□□□□ -1.31
CHD3-213ENST00000571249 STK17AQ9UEE5 414 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 VANGL2Q9ULK5 521 aa6.86□□□□□ -1.31
CHD3-213ENST00000571249 PRSS38A1L453 326 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 FAM171A2A8MVW0 826 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 RASA4BC9J798 803 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 KRIT1O00522 736 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 RASA4O43374 803 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CREB3O43889 395 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CRLF1O75462 422 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 FUCA1P04066 466 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 GSTT1P30711 240 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 RBMXP38159 391 aaKnown RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 GGCXP38435 758 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 SEPHS1P49903 392 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 SERPINH1P50454 418 aaKnown RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 SMSP52788 366 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CDH4P55283 916 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 SNRPFP62306 86 aaKnown RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 AUHQ13825 339 aaKnown RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 IL11RAQ14626 422 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 TMEM52BQ4KMG9 183 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CT47A1Q5JQC4 288 aaPredicted RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 SYPL2Q5VXT5 272 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 ZNF324BQ6AW86 544 aaPredicted RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 LCN10Q6JVE6 187 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 PMF1Q6P1K2 205 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 TMEM207Q6UWW9 146 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CHSY3Q70JA7 882 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 MED25Q71SY5 747 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 EPM2AIP1Q7L775 607 aaPredicted RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
CHD3-213ENST00000571249 DCAF4L2Q8NA75 395 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 ACRBPQ8NEB7 543 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 DNAJB14Q8TBM8 379 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 WNT2BQ93097 391 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 ANAPC16Q96DE5 110 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CLIC6Q96NY7 704 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 LGR4Q9BXB1 951 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 IMPG2Q9BZV3 1241 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CCDC39Q9UFE4 941 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 TRPS1Q9UHF7 1281 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 ACTL7AQ9Y615 435 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CHD5Q8TDI0 1954 aa6.85□□□□□ -1.31
CHD3-213ENST00000571249 CHD3Q12873 2000 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 ESYT3A0FGR9 886 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 IKBKBO14920 756 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 THAP12O43422 761 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 SLCO2B1O94956 709 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 UNC5CO95185 931 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 TRUB2O95900 331 aaKnown RBP6.84□□□□□ -1.31
CHD3-213ENST00000571249 ALPPP05187 535 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 ANKRD34CP0C6C1 535 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 SETSIPP0DME0 302 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 FGF5P12034 268 aa6.84□□□□□ -1.31
CHD3-213ENST00000571249 CD19P15391 556 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms