RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 NRSN1Q8IZ57 195 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 EXD3Q8N9H8 876 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 SLC35G2Q8TBE7 412 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 CTNNBL1Q8WYA6 563 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 CCDC97Q96F63 343 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 WBP1Q96G27 269 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 OLFM3Q96PB7 478 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 DEF6Q9H4E7 631 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 ARFGAP3Q9NP61 516 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 AMACRQ9UHK6 382 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 ADGRG1Q9Y653 693 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 SSU72P8A0A1W2PR75 194 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 MFAP3LO75121 409 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 KRT7P08729 469 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 PIRTP0C851 137 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 THRAP10827 490 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 LIMK2P53671 638 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 RPL26P61254 145 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 PIM3Q86V86 326 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 CNGA4Q8IV77 575 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 SFRP1Q8N474 314 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 CDH19Q9H159 772 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 KCNK6Q9Y257 313 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
GTF3C1-211ENST00000569653 ANKRD66B4E2M5 251 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 PYCARD-AS1I3L0S3 204 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 MTA2O94776 668 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 MX2P20592 715 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 CES1P23141 567 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 NFKBIAP25963 317 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 GPR3P46089 330 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 FASLGP48023 281 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 CYP4F2P78329 520 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 ADCY2Q08462 1091 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 KHDC1Q4VXA5 237 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 GALNT13Q8IUC8 556 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 CCNYQ8ND76 341 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 GPR26Q8NDV2 337 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 EXD1Q8NHP7 514 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 JPH3Q8WXH2 748 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 TMEM159Q96B96 161 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 IMP4Q96G21 291 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 GOLPH3Q9H4A6 298 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 OCIAD1Q9NX40 245 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 SPO11Q9Y5K1 396 aa13.72□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF487B1APH4 448 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 AURKAO14965 403 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 ACP5P13686 325 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 MFSD7Q6UXD7 560 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 KDELC2Q7Z4H8 507 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 OR4D9Q8NGE8 314 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 SPATA22Q8NHS9 363 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 AGAP3Q96P47 875 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 FAM83DQ9H4H8 585 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 VPS18Q9P253 973 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 PDP2Q9P2J9 529 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 ATXN10Q9UBB4 475 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 SAE1Q9UBE0 346 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 TFR2Q9UP52 801 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 SHOC2Q9UQ13 582 aa13.71□□□□□ -0.21
GTF3C1-211ENST00000569653 UBR5O95071 2799 aaPredicted RBP13.71□□□□□ -0.22
GTF3C1-211ENST00000569653 PRR19A6NJB7 356 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 HGSO14964 777 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 AKR1B10O60218 316 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 ASMTLO95671 621 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 MT-CYBP00156 380 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 KRT1P04264 644 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 PECAM1P16284 738 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF8P17098 575 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 CD68P34810 354 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 CA5AP35218 305 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 AP1B1Q10567 949 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 NOMO1Q15155 1222 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 TAZQ16635 292 aa13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 CLPPQ16740 277 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-211ENST00000569653 IYDQ6PHW0 289 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms