RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 SDR42E2A6NKP2 422 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 YKT6O15498 198 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 SLC25A14O95258 325 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 RASGRP1O95267 797 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 MC4RP32245 332 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 BLKP51451 505 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 HNRNPKP61978 463 aaKnown RBP eCLIP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PRAMEP78395 509 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 IL9RQ01113 521 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PPARDQ03181 441 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 ATP13A5Q4VNC0 1218 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 DNAJC21Q5F1R6 531 aaKnown RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PRAMEF14Q5SWL7 426 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 HIBCHQ6NVY1 386 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 RD3Q7Z3Z2 195 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 HID1Q8IV36 788 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PHACTR4Q8IZ21 702 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PDIK1LQ8N165 341 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 NOA1Q8NC60 698 aaKnown RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 ZNF398Q8TD17 642 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 DTX3LQ8TDB6 740 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PEX13Q92968 403 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 GLYATL1Q969I3 302 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 VPS35Q96QK1 796 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 LRRC1Q9BTT6 524 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 ASB8Q9H765 288 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 IL21RQ9HBE5 538 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 WHRNQ9P202 907 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 APOBEC3BQ9UH17 382 aaKnown RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 CRLS1Q9UJA2 301 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 RIMKLBQ9ULI2 386 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 MAD1L1Q9Y6D9 718 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 PRSS38A1L453 326 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 C4orf47A7E2U8 309 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 H7C0S8 307 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 GAPDHSO14556 408 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 GPR39O43194 453 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 GDF9O60383 454 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SDC3O75056 442 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 NME1P15531 152 aaKnown RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 JUNDP17535 347 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 EPHA8P29322 1005 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 MAGEA3P43357 314 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ARL4CP56559 192 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SRP54P61011 504 aaKnown RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 EIF2B5Q13144 721 aaKnown RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 NFATC2Q13469 925 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 PEX6Q13608 980 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 HIF1AQ16665 826 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ALG11Q2TAA5 492 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 BBS9Q3SYG4 887 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ZRANB3Q5FWF4 1079 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ARMC3Q5W041 872 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 DUPD1Q68J44 220 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SNX20Q7Z614 316 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 MPP5Q8N3R9 675 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 BTN2A2Q8WVV5 523 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ULK4Q96C45 1275 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 CDKN2AIPNLQ96HQ2 116 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 COX14Q96I36 57 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 TBATAQ96M53 351 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ZNF778Q96MU6 729 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ZCCHC2Q9C0B9 1178 aaKnown RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 CYP4F12Q9HCS2 524 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 FGF22Q9HCT0 170 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 ARFGAP3Q9NP61 516 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 DNAAF2Q9NVR5 837 aaKnown RBP12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SMOXQ9NWM0 555 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 SLC2A6Q9UGQ3 507 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 TMEM98Q9Y2Y6 226 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 USP34Q70CQ2 3546 aa12.95□□□□□ -0.34
CNOT1-217ENST00000569263 MAGEB16A2A368 324 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-217ENST00000569263 TNFRSF10CO14798 259 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 UGT1A9O60656 530 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 TNFP01375 233 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 CSF2P04141 144 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 ZNF883P0CG24 379 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 CTSEP14091 401 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 PAMP19021 973 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 UGT1A6P19224 532 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 UGT1A1P22309 533 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 UGT1A4P22310 534 aa12.94□□□□□ -0.34
CNOT1-217ENST00000569263 NMBRP28336 390 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms