RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	DRG2	P55039	364 aa	Known RBP	3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	UFM1	P61960	85 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	TRPC3	Q13507	836 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	GPR68	Q15743	365 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	MYLK3	Q32MK0	819 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	USP41	Q3LFD5	358 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	C6orf141	Q5SZD1	244 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	STXBP5	Q5T5C0	1151 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	PLEKHM3	Q6ZWE6	761 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	CACNA2D4	Q7Z3S7	1137 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	STPG4	Q8N801	248 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	WDR20	Q8TBZ3	569 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	TAAR8	Q969N4	342 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	ZBTB10	Q96DT7	871 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	STAMBPL1	Q96FJ0	436 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	MAEL	Q96JY0	434 aa	Known RBP	3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	TFB2M	Q9H5Q4	396 aa	Known RBP	3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	PPCS	Q9HAB8	311 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	LTB4R2	Q9NPC1	389 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	ZDHHC18	Q9NUE0	388 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	KCND2	Q9NZV8	630 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	ACSL5	Q9ULC5	683 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	SCIN	Q9Y6U3	715 aa		3.15	□□□□□ -1.91
UBR1-209	ENST00000569243	KIAA1210	Q9ULL0	1709 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243		A0A0G2JLW4	131 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	TEX13C	A0A0J9YWL9	993 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	USP17L23	D6RBM5	183 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	TNPO2	O14787	897 aa	Known RBP	3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	TSPAN4	O14817	238 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	NCAM2	O15394	837 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	CTSV	O60911	334 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	PRSS56	P0CW18	603 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	GNB3	P16520	340 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	POLR2C	P19387	275 aa	Predicted RBP	3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	CDA	P32320	146 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	AHR	P35869	848 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	ISL1	P61371	349 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	NAE1	Q13564	534 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	WDR38	Q5JTN6	314 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	SIGIRR	Q6IA17	410 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	FAM171B	Q6P995	826 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	SLC22A25	Q6T423	547 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	OR5R1	Q8NH85	324 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	DNAAF4	Q8WXU2	420 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	KLHL29	Q96CT2	875 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	SCLT1	Q96NL6	688 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	MPHOSPH8	Q99549	860 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	FSD1	Q9BTV5	496 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	TTYH1	Q9H313	450 aa	Predicted RBP	3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	ERVMER34-1	Q9H9K5	563 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	MAP3K20	Q9NYL2	800 aa	Known RBP	3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	SLC13A4	Q9UKG4	626 aa		3.14	□□□□□ -1.91
UBR1-209	ENST00000569243	HHLA1	C9JL84	531 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	LDLRAD4	O15165	306 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	PDE9A	O76083	593 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	CSF2RA	P15509	400 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	CPOX	P36551	454 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ARCN1	P48444	511 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	MLLT10	P55197	1068 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	RPP30	P78346	268 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	SORD	Q00796	357 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	PTP4A2	Q12974	167 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ITGA9	Q13797	1035 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	LPAL2	Q16609	132 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	CCDC96	Q2M329	555 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	OR7E24	Q6IFN5	339 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	INO80C	Q6PI98	192 aa	Predicted RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	PQLC2	Q6ZP29	291 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	TRPT1	Q86TN4	253 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	GTSCR1	Q86UQ5	136 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	NRROS	Q86YC3	692 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	SPAG16	Q8N0X2	631 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	SRBD1	Q8N5C6	995 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ARHGEF26	Q96DR7	871 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ABHD8	Q96I13	439 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	APOPT1	Q96IL0	206 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ZNF354B	Q96LW1	612 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	LBHD1	Q9BQE6	289 aa	Predicted RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	UPF2	Q9HAU5	1272 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	LUZP4	Q9P127	313 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	CTNNAL1	Q9UBT7	734 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	ACAD8	Q9UKU7	415 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	C2CD2	Q9Y426	696 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	LRRFIP2	Q9Y608	721 aa	Known RBP	3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	CEPT1	Q9Y6K0	416 aa		3.13	□□□□□ -1.91
UBR1-209	ENST00000569243	AGRN	O00468	2067 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	KRTAP16-1	A8MUX0	517 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	TNFSF14	O43557	240 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	HNRNPA1	P09651	372 aa	Known RBP eCLIP	3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	HOXC9	P31274	260 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	ABCD1	P33897	745 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	IRX1	P78414	480 aa	Predicted RBP	3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	GALNT2	Q10471	571 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	BIRC3	Q13489	604 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	TECRL	Q5HYJ1	363 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	QSOX2	Q6ZRP7	698 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	STXBP4	Q6ZWJ1	553 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	GPR180	Q86V85	440 aa		3.12	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms