RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CCNYL3P0C7X3 344 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 TNFAIP3P21580 790 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 GARSP41250 739 aaKnown RBP12.35□□□□□ -0.43
SNX29-207ENST00000568949 JAM2P57087 298 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 RPL7AP62424 266 aaKnown RBP12.35□□□□□ -0.43
SNX29-207ENST00000568949 TRAF2Q12933 501 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 DNASE1L3Q13609 305 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 ZNF235Q14590 738 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 RFLNAQ6ZTI6 216 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 TICAM1Q8IUC6 712 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 NPWQ8N729 165 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 EXD1Q8NHP7 514 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 FNIP1Q8TF40 1166 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 SEC14L1Q92503 715 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 MGME1Q9BQP7 344 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 UCK1Q9HA47 277 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 NOD2Q9HC29 1040 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 VPS18Q9P253 973 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 CD84Q9UIB8 345 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 PADI1Q9ULC6 663 aa12.35□□□□□ -0.43
SNX29-207ENST00000568949 ZNF106Q9H2Y7 1883 aaKnown RBP12.35□□□□□ -0.43
SNX29-207ENST00000568949 C21orf140B9A014 251 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
SNX29-207ENST00000568949 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 ASMTLO95671 621 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 F3P13726 295 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 DCTP40126 519 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 HCAR3P49019 387 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 PGDP52209 483 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 ZNF135P52742 658 aaPredicted RBP12.34□□□□□ -0.43
SNX29-207ENST00000568949 CA9Q16790 459 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 ZNF787Q6DD87 383 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 RASGRP3Q8IV61 690 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 RAVER1Q8IY67 606 aaKnown RBP12.34□□□□□ -0.43
SNX29-207ENST00000568949 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 PGBD5Q8N414 524 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 PIH1D2Q8WWB5 315 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 THAP4Q8WY91 577 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 SCAMP4Q969E2 229 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 SLC25A23Q9BV35 468 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 TBC1D10AQ9BXI6 508 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 TRIM55Q9BYV6 548 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 CASS4Q9NQ75 786 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
SNX29-207ENST00000568949 PCDHGA9Q9Y5G4 932 aaKnown RBP12.34□□□□□ -0.43
SNX29-207ENST00000568949 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 SPENQ96T58 3664 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 WIPF3A6NGB9 483 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 DNAJB5O75953 348 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PEX11BO96011 259 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 FGF5P12034 268 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 ZNF30P17039 623 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 CTPS1P17812 591 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 CASP14P31944 242 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 GFERP55789 205 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 UBE2IP63279 158 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 OGDHQ02218 1023 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PTSQ03393 145 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PTPRRQ15256 657 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 INPP5JQ15735 1006 aaPredicted RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNX29-207ENST00000568949 NADK2Q4G0N4 442 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 HSP90AA4PQ58FG1 418 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 LRRC66Q68CR7 880 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 CHST15Q7LFX5 561 aaPredicted RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 PSTKQ8IV42 348 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 CT55Q8WUE5 264 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 OR6C1Q96RD1 312 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 SNRNP25Q9BV90 132 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 SLC29A3Q9BZD2 475 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 RCOR3Q9P2K3 495 aaPredicted RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
SNX29-207ENST00000568949 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
SNX29-207ENST00000568949 FZD6O60353 706 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 SNX2O60749 519 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 SPAG6O75602 509 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 ACP5P13686 325 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 EEF1GP26641 437 aaKnown RBP12.32□□□□□ -0.44
SNX29-207ENST00000568949 CLCNKAP51800 687 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 STC1P52823 247 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 SH3BP2P78314 561 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 SYCP1Q15431 976 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 CAMK4Q16566 473 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms