RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 UPP1Q16831 310 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 ZNF554Q86TJ5 538 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 CAMK1DQ8IU85 385 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 CDYL2Q8N8U2 506 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 TBC1D13Q9NVG8 400 aa17.04■□□□□ 0.32
VAC14-210ENST00000568548 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 OR1I1O60431 355 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 MGEA5O60502 916 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 CLCN5P51795 746 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 DGKQP52824 942 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 SNX29P2Q8IUI4 249 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 SPATA2LQ8IUW3 424 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 ADGRG5Q8IZF4 528 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 RTL3Q8N8U3 475 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 KLHL23Q8NBE8 558 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 KCTD14Q9BQ13 255 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 AASSQ9UDR5 926 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 UTS2RQ9UKP6 389 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 PRG3Q9Y2Y8 225 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 C1orf232A0A0U1RR37 186 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 NPEPPSL1A6NEC2 478 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 PSMD3O43242 534 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 LDB2O43679 373 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 RHOBTB1O94844 696 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 PARNO95453 639 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 ZBTB11O95625 1053 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 PEX11BO96011 259 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 CAPNS1P04632 268 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 BMP1P13497 986 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 HK2P52789 917 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 OR4D2P58180 307 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 INPP5AQ14642 412 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 LYSMD3Q7Z3D4 306 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 GPR180Q86V85 440 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 ITCHQ96J02 903 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 SPON2Q9BUD6 331 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 SLC25A51Q9H1U9 297 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 ALG2Q9H553 416 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
VAC14-210ENST00000568548 RNF112Q9ULX5 631 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 SLC27A5Q9Y2P5 690 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 A0A0D9SEW6 157 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 ASPDHA6ND91 283 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 GLP2RO95838 553 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 UGT1A1P22309 533 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 UGT1A4P22310 534 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 HOXC8P31273 242 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 UGT1A3P35503 534 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 UGT1A5P35504 534 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 TRAP1Q12931 704 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 SELPLGQ14242 412 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 RBBP7Q16576 425 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 ZC3H7AQ8IWR0 971 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 KIAA2013Q8IYS2 634 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 MUS81Q96NY9 551 aa17.03■□□□□ 0.32
VAC14-210ENST00000568548 RPRD1AQ96P16 312 aaPredicted RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 RPF2Q9H7B2 306 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 WARS2Q9UGM6 360 aaKnown RBP17.03■□□□□ 0.32
VAC14-210ENST00000568548 H3BMQ9 156 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 BMP2P12643 396 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 CLCQ05315 142 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 IMPG1Q17R60 797 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 FAM45BPQ6NSW5 357 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 DHRSXQ8N5I4 330 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 FAM45AQ8TCE6 357 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 IMP4Q96G21 291 aaKnown RBP17.02■□□□□ 0.32
VAC14-210ENST00000568548 FAR2Q96K12 515 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 COG8Q96MW5 612 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 NPLQ9BXD5 320 aaPredicted RBP17.02■□□□□ 0.32
VAC14-210ENST00000568548 MRPL40Q9NQ50 206 aaKnown RBP17.02■□□□□ 0.32
VAC14-210ENST00000568548 AGPAT4Q9NRZ5 378 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
VAC14-210ENST00000568548 BTN3A1O00481 513 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ACOX3O15254 700 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 NOBOXO60393 691 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 B4GALT3O60512 393 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 IL7RP16871 459 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ITGB6P18564 788 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 MLLT6P55198 1093 aaPredicted RBP17.02■□□□□ 0.31
VAC14-210ENST00000568548 SREBF2Q12772 1141 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 SLC44A4Q53GD3 710 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ARTNQ5T4W7 220 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 TAF2Q6P1X5 1199 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ITIH5Q86UX2 942 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 SLC22A9Q8IVM8 553 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ANKFN1Q8N957 763 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 TRIB2Q92519 343 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 ZBED2Q9BTP6 218 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 DGCR6LQ9BY27 220 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 PLGRKTQ9HBL7 147 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 VPS45Q9NRW7 570 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 SELENONQ9NZV5 590 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 SARDHQ9UL12 918 aa17.02■□□□□ 0.31
VAC14-210ENST00000568548 PDCD11Q14690 1871 aaKnown RBP17.02■□□□□ 0.31
VAC14-210ENST00000568548 CHRNA1P02708 482 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms