RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 CBARPQ8N350 705 aaPredicted RBP16.02■□□□□ 0.16
CLK3-223ENST00000568488 SLC30A5Q8TAD4 765 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 AP2M1Q96CW1 435 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 TIGD1Q96MW7 591 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 C11orf70Q9BRQ4 267 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 ABCG8Q9H221 673 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 AKIRIN1Q9H9L7 192 aaPredicted RBP16.02■□□□□ 0.16
CLK3-223ENST00000568488 CPNE7Q9UBL6 633 aa16.02■□□□□ 0.16
CLK3-223ENST00000568488 G3BP2Q9UN86 482 aaKnown RBP16.02■□□□□ 0.16
CLK3-223ENST00000568488 A0A0U1RQS6 177 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 ANKUB1A6NFN9 424 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 A6NL46 340 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 DFFAO00273 331 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 SOD1P00441 154 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 FGF5P12034 268 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 SLC2A4P14672 509 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 TNFAIP3P21580 790 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 GPD1P21695 349 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 PTPN4P29074 926 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 RFC1P35251 1148 aaPredicted RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 RPS15P62841 145 aaKnown RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 DPTQ07507 201 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 TSPAN33Q86UF1 283 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 RHOT1Q8IXI2 618 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 CISD2Q8N5K1 135 aaKnown RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 RBMXL3Q8N7X1 1067 aaKnown RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 SCAMP4Q969E2 229 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 PNPLA2Q96AD5 504 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 SNRNP40Q96DI7 357 aaKnown RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 UNKQ9C0B0 810 aaKnown RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 BRD8Q9H0E9 1235 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 ASF1BQ9NVP2 202 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 FZD10Q9ULW2 581 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 PHTF1Q9UMS5 762 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 PCDHGB7Q9Y5F8 929 aa16.01■□□□□ 0.15
CLK3-223ENST00000568488 PCYT1BQ9Y5K3 369 aaPredicted RBP16.01■□□□□ 0.15
CLK3-223ENST00000568488 A0A1W2PQ67 120 aa16■□□□□ 0.15
CLK3-223ENST00000568488 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
CLK3-223ENST00000568488 PSMD11O00231 422 aa16■□□□□ 0.15
CLK3-223ENST00000568488 ZNF185O15231 689 aa16■□□□□ 0.15
CLK3-223ENST00000568488 TIAF1O95411 115 aa16■□□□□ 0.15
CLK3-223ENST00000568488 C9P02748 559 aa16■□□□□ 0.15
CLK3-223ENST00000568488 ACP5P13686 325 aa16■□□□□ 0.15
CLK3-223ENST00000568488 CTPS1P17812 591 aa16■□□□□ 0.15
CLK3-223ENST00000568488 MMP8P22894 467 aa16■□□□□ 0.15
CLK3-223ENST00000568488 PTGIRP43119 386 aa16■□□□□ 0.15
CLK3-223ENST00000568488 RENBPP51606 427 aa16■□□□□ 0.15
CLK3-223ENST00000568488 WDR59Q6PJI9 974 aa16■□□□□ 0.15
CLK3-223ENST00000568488 ARHGAP36Q6ZRI8 547 aa16■□□□□ 0.15
CLK3-223ENST00000568488 TECPR1Q7Z6L1 1165 aa16■□□□□ 0.15
CLK3-223ENST00000568488 SYVN1Q86TM6 617 aa16■□□□□ 0.15
CLK3-223ENST00000568488 FDCSPQ8NFU4 85 aa16■□□□□ 0.15
CLK3-223ENST00000568488 AGAP2Q99490 1192 aa16■□□□□ 0.15
CLK3-223ENST00000568488 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
CLK3-223ENST00000568488 SELENOOQ9BVL4 669 aa16■□□□□ 0.15
CLK3-223ENST00000568488 GPR87Q9BY21 358 aa16■□□□□ 0.15
CLK3-223ENST00000568488 OGFRQ9NZT2 677 aa16■□□□□ 0.15
CLK3-223ENST00000568488 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
CLK3-223ENST00000568488 KIR2DS5A0A0G2JLQ3 304 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 A0A0G2JNG1 304 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 KIR2DS3K7RE56 304 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 DAPK3O43293 454 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 HTRA2O43464 458 aaPredicted RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 KIF1CO43896 1103 aaKnown RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 UBXN7O94888 489 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 ATP1A1P05023 1023 aaKnown RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 F3P13726 295 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 CDK18Q07002 472 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 IL10RAQ13651 578 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 RFTN1Q14699 578 aaPredicted RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 KIR2DS5Q14953 304 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.99■□□□□ 0.15
CLK3-223ENST00000568488 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 CACHD1Q5VU97 1274 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 SP5Q6BEB4 398 aaPredicted RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 IQCKQ8N0W5 287 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 EXD1Q8NHP7 514 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 SLC20A1Q8WUM9 679 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 NUDT9Q9BW91 350 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 PDE7BQ9NP56 450 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 ENTPD4Q9Y227 616 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 FARSAQ9Y285 508 aaKnown RBP15.99■□□□□ 0.15
CLK3-223ENST00000568488 APCP25054 2843 aa15.99■□□□□ 0.15
CLK3-223ENST00000568488 ZFHX3Q15911 3703 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 LILRA5A6NI73 299 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 OR5K4A6NMS3 321 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 TOX3O15405 576 aaPredicted RBP15.98■□□□□ 0.15
CLK3-223ENST00000568488 CCP110O43303 1012 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 SOCS5O75159 536 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 IL10RBQ08334 325 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 LBRQ14739 615 aaKnown RBP15.98■□□□□ 0.15
CLK3-223ENST00000568488 PLEKHN1Q494U1 663 aaPredicted RBP15.98■□□□□ 0.15
CLK3-223ENST00000568488 FAM92BQ6ZTR7 304 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 TRIM48Q8IWZ4 208 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 MCEMP1Q8IX19 187 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 EPS8L1Q8TE68 723 aa15.98■□□□□ 0.15
CLK3-223ENST00000568488 SCRN2Q96FV2 425 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms