RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RFLNAQ6ZTI6 216 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 RPS27LQ71UM5 84 aaKnown RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 SERPINA9Q86WD7 417 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 SFTPA1Q8IWL2 248 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 TXNDC5Q8NBS9 432 aaKnown RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 GPR26Q8NDV2 337 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 ZNF398Q8TD17 642 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 FRS2Q8WU20 508 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 CCDC97Q96F63 343 aaPredicted RBP7.02□□□□□ -1.28
SMG1-215ENST00000568239 UBXN10Q96LJ8 280 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 BIRC8Q96P09 236 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 SORT1Q99523 831 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 EBF4Q9BQW3 602 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 BOCQ9BWV1 1114 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 CLPBQ9H078 707 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 WWP1Q9H0M0 922 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 CLDND1Q9NY35 253 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 IL36AQ9UHA7 158 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 TRIOBPQ9H2D6 2365 aa7.02□□□□□ -1.28
SMG1-215ENST00000568239 NCF1BA6NI72 391 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 NCF1CA8MVU1 366 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 TARM1B6A8C7 271 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 WASH3PC4AMC7 463 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 PRMT5O14744 637 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 TRIM16O95361 564 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CBX6O95503 412 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 IL1BP01584 269 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CTSLP07711 333 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 NCF1P14598 390 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 CD1DP15813 335 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ZNF7P17097 686 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 KCNA5P22460 613 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ATP5F1P24539 256 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 PTGER3P43115 390 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 KCNC1P48547 511 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ALDH18A1P54886 795 aaKnown RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 TIAL1Q01085 375 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMG1-215ENST00000568239 PTSQ03393 145 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 DLX2Q07687 328 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 CDKN3Q16667 212 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 TRIM67Q6ZTA4 783 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 SNX20Q7Z614 316 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ISCA2Q86U28 154 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CACUL1Q86Y37 369 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 TDHQ8IZJ6 230 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 STK40Q8N2I9 435 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMG1-215ENST00000568239 WFIKKN2Q8TEU8 576 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 PTERQ96BW5 349 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ECHDC3Q96DC8 303 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 SLC30A3Q99726 388 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ILKAPQ9H0C8 392 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 ACTR5Q9H9F9 607 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 HPS4Q9NQG7 708 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 KCNK4Q9NYG8 393 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 NCKIPSDQ9NZQ3 722 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ARMCX1Q9P291 453 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 FBXO10Q9UK96 956 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 COMMD10Q9Y6G5 202 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 H3BMM5 538 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 NEMP1O14524 444 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 SUPT7LO94864 414 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ASLP04424 464 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 GFAPP14136 432 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 HNRNPLP14866 589 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMG1-215ENST00000568239 TSPAN8P19075 237 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 MPSTP25325 297 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 GDI1P31150 447 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CA5AP35218 305 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 ASPHQ12797 758 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 RUNX3Q13761 415 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 FBXO48Q5FWF7 155 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CTSL3PQ5NE16 218 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 BRAT1Q6PJG6 821 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 SERPINA13PQ6UXR4 307 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CERS6Q6ZMG9 384 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 KIAA0907Q7Z7F0 614 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CPNE9Q8IYJ1 553 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 FGF14Q92915 247 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 VOPP1Q96AW1 172 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 PRR11Q96HE9 360 aaPredicted RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 MYADMQ96S97 322 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 PLA2G2FQ9BZM2 168 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 UTP6Q9NYH9 597 aaKnown RBP7.02□□□□□ -1.29
SMG1-215ENST00000568239 HAO1Q9UJM8 370 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 MED16Q9Y2X0 877 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 NUMBLQ9Y6R0 609 aa7.02□□□□□ -1.29
SMG1-215ENST00000568239 CXorf51AA0A1B0GTR3 108 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ANTXRLA6NF34 631 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 A8MT66 165 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TMEM114B3SHH9 223 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 UBXN8O00124 270 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 BTN3A1O00481 513 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SMIM24O75264 130 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 IPO13O94829 963 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 ESR1P03372 595 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms