RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 IGDCC3Q8IVU1 814 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 FBXO25Q8TCJ0 367 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 MFSD3Q96ES6 412 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 SUDS3Q9H7L9 328 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-222ENST00000568034 PLAC1Q9HBJ0 212 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 ZDHHC18Q9NUE0 388 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 OAS3Q9Y6K5 1087 aaKnown RBP17.87■□□□□ 0.45
COMMD4-222ENST00000568034 ADAMTS9Q9P2N4 1935 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 FAM186AA6NE01 2351 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 GVINP1Q7Z2Y8 2422 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 LRP4O75096 1905 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 DNAH14Q0VDD8 3507 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 LNP1A1A4G5 178 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 CCDC162PA2VCL2 907 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 TMEM202A6NGA9 273 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 OR51F1A6NGY5 319 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 AGAP14A8MT82 685 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 ARHGAP33O14559 1287 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 INPP4BO15327 924 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A9O60656 530 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 SRP72O76094 671 aaKnown RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 PRSS56P0CW18 603 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 ENGP17813 658 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A6P19224 532 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A1P22309 533 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A4P22310 534 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 MC4RP32245 332 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A3P35503 534 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A5P35504 534 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 PLTPP55058 493 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 C21orf59P57076 290 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 CALCOCO2Q13137 446 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 EIF2B5Q13144 721 aaKnown RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 HIF1AQ16665 826 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 SKIDA1Q1XH10 827 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 TMEM135Q86UB9 458 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 TRIM74Q86UV6 250 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 DCP2Q8IU60 420 aaKnown RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 GLYATL1Q969I3 302 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 HIC2Q96JB3 615 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 FCRL3Q96P31 734 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 VPS35Q96QK1 796 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 NUSAP1Q9BXS6 441 aaKnown RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A7Q9HAW7 530 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A10Q9HAW8 530 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 UGT1A8Q9HAW9 530 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 EPB41L5Q9HCM4 733 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 FGF22Q9HCT0 170 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 PHPT1Q9NRX4 125 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-222ENST00000568034 RXFP3Q9NSD7 469 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 SMOXQ9NWM0 555 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 APPL1Q9UKG1 709 aa17.86■□□□□ 0.45
COMMD4-222ENST00000568034 TRBV5-4A0A0C4DH59 114 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 FAM237BA0A1B0GVD1 139 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 CACNB4O00305 520 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-222ENST00000568034 MAGEC1O60732 1142 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ECHS1P30084 290 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 FOXN2P32314 431 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ARL4CP56559 192 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 NFATC2Q13469 925 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 SHBQ15464 509 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ZNF423Q2M1K9 1284 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 BBS9Q3SYG4 887 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 KHDC1Q4VXA5 237 aaKnown RBP17.85■□□□□ 0.45
COMMD4-222ENST00000568034 DNAJC21Q5F1R6 531 aaKnown RBP17.85■□□□□ 0.45
COMMD4-222ENST00000568034 PDIK1LQ8N165 341 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ZNF398Q8TD17 642 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 BTN2A2Q8WVV5 523 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 HDAC10Q969S8 669 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 SKA1Q96BD8 255 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 PDXPQ96GD0 296 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 WDR92Q96MX6 357 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ZDHHC5Q9C0B5 715 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ERVMER34-1Q9H9K5 563 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 GDF3Q9NR23 364 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 KLF15Q9UIH9 416 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 TEX264Q9Y6I9 313 aa17.85■□□□□ 0.45
COMMD4-222ENST00000568034 ZCWPW2A0A1B0GU75 182 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 GOT2P00505 430 aaKnown RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 FUCA1P04066 466 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 CEACAM5P06731 702 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ARCN1P48444 511 aaKnown RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 CDKN1CP49918 316 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 THOP1P52888 689 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 CAV1Q03135 178 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ITGA9Q13797 1035 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 FASTKD3Q14CZ7 662 aaKnown RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ALG11Q2TAA5 492 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ANKRD20A4Q4UJ75 823 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 PRAMEF14Q5SWL7 426 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 ZNF648Q5T619 568 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 KIAA0930Q6ICG6 404 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-222ENST00000568034 CASC4Q6P4E1 433 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 PRR23CQ6ZRP0 262 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 SNX20Q7Z614 316 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 PARGQ86W56 976 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 PIANPQ8IYJ0 282 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 OR1E3Q8WZA6 343 aa17.84■□□□□ 0.45
COMMD4-222ENST00000568034 CCDC97Q96F63 343 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms