RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 NDUFS3O75489 264 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 ENO1P06733 434 aaKnown RBP23.16■■□□□ 1.3
LINC00543-201ENST00000567234 CD9P21926 228 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 MPSTP25325 297 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 PBX2P40425 430 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 CCR2P41597 374 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 EPHB1P54762 984 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 GALNT1Q10472 559 aaPredicted RBP23.16■■□□□ 1.3
LINC00543-201ENST00000567234 AARS2Q5JTZ9 985 aaKnown RBP23.16■■□□□ 1.3
LINC00543-201ENST00000567234 ATXN7L2Q5T6C5 722 aaPredicted RBP23.16■■□□□ 1.3
LINC00543-201ENST00000567234 GPR158Q5T848 1215 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 CMTM8Q8IZV2 173 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 LEMD2Q8NC56 503 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 SH3RF2Q8TEC5 729 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 POF1BQ8WVV4 589 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 MYO19Q96H55 970 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 LMLNQ96KR4 655 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 CCDC68Q9H2F9 335 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 SYTL2Q9HCH5 934 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 POLR3BQ9NW08 1133 aaPredicted RBP23.16■■□□□ 1.3
LINC00543-201ENST00000567234 PLK2Q9NYY3 685 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 PLA2G4CQ9UP65 541 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 MYO7AQ13402 2215 aa23.16■■□□□ 1.3
LINC00543-201ENST00000567234 A8MT66 165 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PRR5-ARHGAP8B1AHC4 643 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 SPECC1L-ADORA2AF8WAN1 911 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 HTRA2O43464 458 aaPredicted RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 COQ9O75208 318 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 ZNF37AP17032 561 aaPredicted RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 ARHGAP8P85298 464 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 NFKB2Q00653 900 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 CDC16Q13042 620 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 ARHGAP15Q53QZ3 475 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 TPGS1Q6ZTW0 290 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 CCNYL1Q8N7R7 359 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 EFHBQ8N7U6 833 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 TTC16Q8NEE8 873 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 TUBGCP5Q96RT8 1024 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 TAS2R13Q9NYV9 303 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 YBX2Q9Y2T7 364 aaKnown RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 K7ERQ8 282 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 SLC4A1P02730 911 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 CD1DP15813 335 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 HMGCLP35914 325 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PDAP1Q13442 181 aaKnown RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 VWA5B1Q5TIE3 1220 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PIM3Q86V86 326 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PDSS2Q86YH6 399 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 RHEBL1Q8TAI7 183 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PIH1D2Q8WWB5 315 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 SGF29Q96ES7 293 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 UNKQ9C0B0 810 aaKnown RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 EML4Q9HC35 981 aaKnown RBP23.15■■□□□ 1.3
LINC00543-201ENST00000567234 IL17CQ9P0M4 197 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 ZDHHC2Q9UIJ5 367 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 FKBPLQ9UIM3 349 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 PKP3Q9Y446 797 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 ZNF711Q9Y462 761 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 COMMD10Q9Y6G5 202 aa23.15■■□□□ 1.3
LINC00543-201ENST00000567234 TNRC18O15417 2968 aaPredicted RBP23.14■■□□□ 1.3
LINC00543-201ENST00000567234 SMAD6O43541 496 aaKnown RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 IGSF6O95976 241 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 MC4RP32245 332 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 CD70P32970 193 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 ADARP55265 1226 aaKnown RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 BCL2L1Q07817 233 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 MED21Q13503 144 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 UBAP2LQ14157 1087 aaKnown RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 ZNF557Q8N988 423 aaPredicted RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 MAPK15Q8TD08 544 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 DTX3LQ8TDB6 740 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 ISG20Q96AZ6 181 aaKnown RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 DGCR14Q96DF8 476 aaKnown RBP23.14■■□□□ 1.29
LINC00543-201ENST00000567234 FAM161BQ96MY7 647 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 SMIM14Q96QK8 99 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 GDF15Q99988 308 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 TRMOQ9BU70 441 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 TM6SF2Q9BZW4 377 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 TCF7L2Q9NQB0 619 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 HCFC1R1Q9NWW0 138 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 ZMYM5Q9UJ78 669 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 CLEC4EQ9ULY5 219 aa23.14■■□□□ 1.29
LINC00543-201ENST00000567234 NOTCH4Q99466 2003 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 B2RBV5 119 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 GRID2O43424 1007 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 ASLP04424 464 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 HNRNPA1P09651 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
LINC00543-201ENST00000567234 UBTFL6P0CB48 400 aaPredicted RBP23.13■■□□□ 1.29
LINC00543-201ENST00000567234 PEX6Q13608 980 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 MYBPC3Q14896 1274 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 SLC9B1Q4ZJI4 515 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 TRIM74Q86UV6 250 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 TRIM73Q86UV7 250 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 L3HYPDHQ96EM0 354 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 FAR2Q96K12 515 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 TFB2MQ9H5Q4 396 aaKnown RBP23.13■■□□□ 1.29
LINC00543-201ENST00000567234 ALG9Q9H6U8 611 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 INTS6Q9UL03 887 aaKnown RBP23.13■■□□□ 1.29
LINC00543-201ENST00000567234 MYOFQ9NZM1 2061 aa23.13■■□□□ 1.29
LINC00543-201ENST00000567234 UBA6A0AVT1 1052 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms