RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ANXA6P08133 673 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 GM2AP17900 193 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 ACP1P24666 158 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 ECHS1P30084 290 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 RPL22P35268 128 aaKnown RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 ETV3P41162 512 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 MAGEA6P43360 314 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 VPS41P49754 854 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 SARNPP82979 210 aaKnown RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 E2F1Q01094 437 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 PTSQ03393 145 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 CDK18Q07002 472 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 IHHQ14623 411 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 TRIP13Q15645 432 aaPredicted RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 QPCTQ16769 361 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 PARP6Q2NL67 630 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 PRRT3Q5FWE3 981 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 BEND6Q5SZJ8 279 aaPredicted RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 IZUMO3Q5VZ72 239 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 HIBCHQ6NVY1 386 aaPredicted RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 KDM7AQ6ZMT4 941 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 Q6ZVL8 140 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 PID1Q7Z2X4 250 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 TECPR1Q7Z6L1 1165 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 TSPAN33Q86UF1 283 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 HID1Q8IV36 788 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 MREGQ8N565 214 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 OR56A4Q8NGH8 313 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 FBXO25Q8TCJ0 367 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 EIF2B3Q9NR50 452 aaKnown RBP13.38□□□□□ -0.27
CLK3-218ENST00000566926 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 FAM153AQ9UHL3 310 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 KLF15Q9UIH9 416 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 DGKBQ9Y6T7 804 aa13.38□□□□□ -0.27
CLK3-218ENST00000566926 C1orf232A0A0U1RR37 186 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 LMO7DNF2Z398 122 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 AP3B1O00203 1094 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
CLK3-218ENST00000566926 CKMT1AP12532 417 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 GPR1P46091 355 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RPIAP49247 311 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ACADVLP49748 655 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 STC1P52823 247 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ITGA8P53708 1063 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 WASHC5Q12768 1159 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 DNAJC3Q13217 504 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ALG11Q2TAA5 492 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ANKRD20A2Q5SQ80 823 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RNASEH2BQ5TBB1 312 aaKnown RBP13.37□□□□□ -0.27
CLK3-218ENST00000566926 ANKRD20A1Q5TYW2 823 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ANKRD20A3Q5VUR7 823 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 LVRNQ6Q4G3 990 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ZDHHC24Q6UX98 284 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 TMPRSS7Q7RTY8 843 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 HDXQ7Z353 690 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RBFAQ8N0V3 343 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
CLK3-218ENST00000566926 TADA1Q96BN2 335 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 FCRL5Q96RD9 977 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 LRRC61Q9BV99 259 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 TEX101Q9BY14 249 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 CDH19Q9H159 772 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 VIPAS39Q9H9C1 493 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RAB6BQ9NRW1 208 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
CLK3-218ENST00000566926 CHD8Q9HCK8 2581 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 E7EVH7 732 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLK3-218ENST00000566926 PSMD3O43242 534 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 PMPCBO75439 489 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 CLDN7O95471 211 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 NDST3O95803 873 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 TOP3BO95985 862 aaKnown RBP13.36□□□□□ -0.27
CLK3-218ENST00000566926 MT-CYBP00156 380 aaPredicted RBP13.36□□□□□ -0.27
CLK3-218ENST00000566926 EPOP01588 193 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 ZSCAN5DPP0CG00 497 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 MYBL2P10244 700 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 ETS1P14921 441 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 SPINK2P20155 84 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 TPSB2P20231 275 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
CLK3-218ENST00000566926 CBLBQ13191 982 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 SEMA5AQ13591 1074 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 PRPSAP1Q14558 356 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms