RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CCDC17Q96LX7 622 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DEPDC7Q96QD5 511 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 EBNA1BP2Q99848 306 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ROGDIQ9GZN7 287 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LHPPQ9H008 270 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SEMA6AQ9H2E6 1030 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CASS4Q9NQ75 786 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NANSQ9NR45 359 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 EGFL7Q9UHF1 273 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PCDHGC3Q9UN70 934 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 POLHQ9Y253 713 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MYH4Q9Y623 1939 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR5K4A6NMS3 321 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 UPK1BO75841 260 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARIH2O95376 493 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ATP4BP51164 291 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GABARAPL2P60520 117 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MPP1Q00013 466 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARHGAP11BQ3KRB8 267 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LBHQ53QV2 105 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 LIN9Q5TKA1 542 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ANKS3Q6ZW76 656 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NIPA1Q7RTP0 329 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PHF13Q86YI8 300 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 DNAJC10Q8IXB1 793 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 UNC5BQ8IZJ1 945 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NLGN1Q8N2Q7 840 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TDRD5Q8NAT2 981 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ASB9Q96DX5 294 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CENPNQ96H22 339 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 CPXM1Q96SM3 734 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IDI2Q9BXS1 227 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM240BA0A1B0GVZ2 78 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 H0Y626 953 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NDUFS8O00217 210 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PPP1R11O60927 126 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ABCB7O75027 752 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SLITRK5O94991 958 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SBK3P0C264 359 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 POU1F1P28069 291 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GSTM2P28161 218 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IL12AP29459 219 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CAP2P40123 477 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CABP4P57796 275 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR2B6P58173 313 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LSM3P62310 102 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 PTSQ03393 145 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GBE1Q04446 702 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IL18Q14116 193 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 INTS6LQ5JSJ4 861 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 SHEQ5VZ18 495 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SYCE2Q6PIF2 218 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ASB18Q6ZVZ8 466 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PTAR1Q7Z6K3 402 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 RHPN2Q8IUC4 686 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KDM1BQ8NB78 822 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZSWIM2Q8NEG5 633 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR4M1Q8NGD0 313 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MARC2Q969Z3 335 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GIMAP5Q96F15 307 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LPIN3Q9BQK8 851 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KIFC1Q9BW19 673 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ACAT2Q9BWD1 397 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PLSCR3Q9NRY6 295 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NUP50Q9UKX7 468 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 VANGL2Q9ULK5 521 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CDK5RAP2Q96SN8 1893 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PLA2G6O60733 806 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IPO13O94829 963 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 MBL2P11226 248 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ACVR2AP27037 513 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 WEE1P30291 646 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GARSP41250 739 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 CEBPDP49716 269 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 ADPRMQ3LIE5 342 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TMEM236Q5W0B7 351 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM156AQ8NDB6 213 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 BPIFB1Q8TDL5 484 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 JPH3Q8WXH2 748 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM84AQ96KN4 292 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MARK4Q96L34 752 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ACCSQ96QU6 501 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PCYT2Q99447 389 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IL1RL2Q9HB29 575 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 POLMQ9NP87 494 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 GTF2IRD1Q9UHL9 959 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ADAM28Q9UKQ2 775 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RAP2CQ9Y3L5 183 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 A8MX80 341 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ZNF487B1APH4 448 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 GMFGO60234 142 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 WDR47O94967 919 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 SNX4O95219 450 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ALBP02768 609 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 GMPRP36959 345 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 YAP1P46937 504 aaKnown RBP2.9□□□□□ -1.94
CHD9-218ENST00000566029 AP1S2P56377 157 aa2.9□□□□□ -1.94
CHD9-218ENST00000566029 ACTR2P61160 394 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms