RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 SHBQ15464 509 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 SKIDA1Q1XH10 827 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 WSCD2Q2TBF2 565 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 RAB44Q7Z6P3 723 aaPredicted RBP25.81■■□□□ 1.72
NME3-208ENST00000565379 IQCHQ86VS3 1027 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 GATAD2AQ86YP4 633 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 PDIK1LQ8N165 341 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 AP2M1Q96CW1 435 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 CAAP1Q9H8G2 361 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 MRM3Q9HC36 420 aaKnown RBP25.81■■□□□ 1.72
NME3-208ENST00000565379 PCDHGB2Q9Y5G2 931 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 FREM2Q5SZK8 3169 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 CACNA1GO43497 2377 aa25.81■■□□□ 1.72
NME3-208ENST00000565379 SRRM3A6NNA2 597 aaPredicted RBP25.8■■□□□ 1.72
NME3-208ENST00000565379 GOLGA8MH3BSY2 632 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 SLC4A1P02730 911 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 TSHRP16473 764 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 PSMA3P25788 255 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 CD38P28907 300 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 CCT8P50990 548 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 ZNF140P52738 457 aaPredicted RBP25.8■■□□□ 1.72
NME3-208ENST00000565379 ARL4CP56559 192 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 SLC7A5Q01650 507 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 GUCY2DQ02846 1103 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 SEPT6Q14141 434 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 PDPK2PQ6A1A2 396 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 RHBDD1Q8TEB9 315 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 ZCCHC14Q8WYQ9 949 aaKnown RBP25.8■■□□□ 1.72
NME3-208ENST00000565379 MYOCQ99972 504 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 FOXP3Q9BZS1 431 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 ABCG8Q9H221 673 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 TOR4AQ9NXH8 423 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 TCAF1Q9Y4C2 921 aa25.8■■□□□ 1.72
NME3-208ENST00000565379 DMXL2Q8TDJ6 3036 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 A0A0U1RQS6 177 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 GOLGA8CPA6NN73 597 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 BHMG1C9JSJ3 638 aaPredicted RBP25.79■■□□□ 1.72
NME3-208ENST00000565379 SLU7O95391 586 aaKnown RBP25.79■■□□□ 1.72
NME3-208ENST00000565379 MGAT1P26572 445 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 SPAM1P38567 509 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 CBLBQ13191 982 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 KYAT3Q6YP21 454 aaKnown RBP25.79■■□□□ 1.72
NME3-208ENST00000565379 ABI3BPQ7Z7G0 1075 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 DCP2Q8IU60 420 aaKnown RBP25.79■■□□□ 1.72
NME3-208ENST00000565379 MFSD2AQ8NA29 543 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 OR4K2Q8NGD2 314 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 ART4Q93070 314 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 LRRC39Q96DD0 335 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 NAT9Q9BTE0 207 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 ZSCAN5AQ9BUG6 496 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 KIFC1Q9BW19 673 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 GRHL1Q9NZI5 618 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 SAMD15Q9P1V8 674 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 APPL1Q9UKG1 709 aa25.79■■□□□ 1.72
NME3-208ENST00000565379 A0A1B0GTQ1 180 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 A6NNZ2 444 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 RAD51BO15315 384 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 TP73O15350 636 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 FLRT2O43155 660 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 BPIP17213 487 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 RABIFP47224 123 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 YPEL5P62699 121 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 IRF4Q15306 451 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 HIF1AQ16665 826 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 TSTD2Q5T7W7 516 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 HENMT1Q5T8I9 393 aaKnown RBP25.78■■□□□ 1.72
NME3-208ENST00000565379 PNCKQ6P2M8 343 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 SPATS2Q86XZ4 545 aaKnown RBP25.78■■□□□ 1.72
NME3-208ENST00000565379 CCNJLQ8IV13 435 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 TRAM1L1Q8N609 369 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 PHACTR1Q9C0D0 580 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 EPB41L5Q9HCM4 733 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 NLE1Q9NVX2 485 aaPredicted RBP25.78■■□□□ 1.72
NME3-208ENST00000565379 SOX13Q9UN79 622 aa25.78■■□□□ 1.72
NME3-208ENST00000565379 H7C0S8 307 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 HOXC4P09017 264 aaPredicted RBP25.77■■□□□ 1.72
NME3-208ENST00000565379 NXPH1P58417 271 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 GCNT7Q6ZNI0 430 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 GLRX5Q86SX6 157 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 MARCH9Q86YJ5 346 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 GPR26Q8NDV2 337 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 ELF4Q99607 663 aaPredicted RBP25.77■■□□□ 1.72
NME3-208ENST00000565379 BPIFA1Q9NP55 256 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 FZD3Q9NPG1 666 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 MBNL1Q9NR56 388 aaKnown RBP25.77■■□□□ 1.72
NME3-208ENST00000565379 SYBUQ9NX95 663 aa25.77■■□□□ 1.72
NME3-208ENST00000565379 DMGDHQ9UI17 866 aaKnown RBP25.77■■□□□ 1.72
NME3-208ENST00000565379 EIF3HO15372 352 aaKnown RBP eCLIP25.76■■□□□ 1.71
NME3-208ENST00000565379 PCDHGA12O60330 932 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 AVILO75366 819 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 PCCBP05166 539 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 IGFALSP35858 605 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 TRIM23P36406 574 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 GPR1P46091 355 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 PLTPP55058 493 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 ITGA9Q13797 1035 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 RAET1GQ6H3X3 334 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 CASC4Q6P4E1 433 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 CEP128Q6ZU80 1094 aa25.76■■□□□ 1.71
NME3-208ENST00000565379 IFT20Q8IY31 132 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms