RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 XPAP23025 273 aaPredicted RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 RPS3P23396 243 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLN6-205ENST00000564846 ATP5F1P24539 256 aaPredicted RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 SKIV2L2P42285 1042 aaKnown RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 SEMG2Q02383 582 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 CHRNA6Q15825 494 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 ITPRIPL2Q3MIP1 535 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 CTSL3PQ5NE16 218 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 GPR26Q8NDV2 337 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 RFWD2Q8NHY2 731 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 OR8D1Q8WZ84 308 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 UNKQ9C0B0 810 aaKnown RBP19.44■□□□□ 0.7
CLN6-205ENST00000564846 TMEM245Q9H330 911 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 PRO3102Q9H379 93 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 PKD2L2Q9NZM6 624 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 CRLS1Q9UJA2 301 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 DCTN4Q9UJW0 460 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 MTCH2Q9Y6C9 303 aa19.44■□□□□ 0.7
CLN6-205ENST00000564846 DOCK8Q8NF50 2099 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 AGAP14A8MT82 685 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 GPR39O43194 453 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 DLX3O60479 287 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 DCTN3O75935 186 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 C1SP09871 688 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 CD1DP15813 335 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 TFEBP19484 476 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 ACRV1P26436 265 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 LTBRP36941 435 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 SPINT3P49223 89 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 ARFIP2P53365 341 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 PFKPQ01813 784 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 ZNF234Q14588 700 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 C9orf64Q5T6V5 341 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 UGT3A1Q6NUS8 523 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 CHRDL2Q6WN34 429 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 NUDT18Q6ZVK8 323 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 TTC7BQ86TV6 843 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 GBP7Q8N8V2 638 aaPredicted RBP19.43■□□□□ 0.7
CLN6-205ENST00000564846 TMIEQ8NEW7 156 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 PIWIL2Q8TC59 973 aaKnown RBP19.43■□□□□ 0.7
CLN6-205ENST00000564846 GATA5Q9BWX5 397 aaPredicted RBP19.43■□□□□ 0.7
CLN6-205ENST00000564846 PCDH12Q9NPG4 1184 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 COL4A3Q01955 1670 aa19.43■□□□□ 0.7
CLN6-205ENST00000564846 A0A0G2JND7 137 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 C16orf96A6NNT2 1141 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 KAT7O95251 611 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 GRIA2P42262 883 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 DNAJB13P59910 316 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 ELAVL3Q14576 367 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 COL19A1Q14993 1142 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 LRRC73Q5JTD7 316 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 PAQR3Q6TCH7 311 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 SERPINA13PQ6UXR4 307 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 NAPRTQ6XQN6 538 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 ISCA2Q86U28 154 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 WDR75Q8IWA0 830 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 NXPE1Q8N323 547 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 NKAPQ8N5F7 415 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 GPR21Q99679 349 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 CLPBQ9H078 707 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 KCNK13Q9HB14 408 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 ABCF3Q9NUQ8 709 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 KCNK4Q9NYG8 393 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 ZNF106Q9H2Y7 1883 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 SCN8AQ9UQD0 1980 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 F8W8V4 182 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 H3BMM5 538 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 LYPLA1O75608 230 aaPredicted RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 ATP6V0D1P61421 351 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 CCDC15Q0P6D6 951 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 SETDB1Q15047 1291 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 ERAP2Q6P179 960 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 KIAA1549LQ6ZVL6 1849 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 DPPA4Q7L190 304 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 RHEBL1Q8TAI7 183 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 FAM136AQ96C01 138 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 SORT1Q99523 831 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 DERL2Q9GZP9 239 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 DRC3Q9H069 523 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 TFB2MQ9H5Q4 396 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 ALG9Q9H6U8 611 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 RAD18Q9NS91 495 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 THAP10Q9P2Z0 257 aaPredicted RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 TRMT6Q9UJA5 497 aaKnown RBP19.42■□□□□ 0.7
CLN6-205ENST00000564846 GNPTGQ9UJJ9 305 aa19.42■□□□□ 0.7
CLN6-205ENST00000564846 E5RI56 91 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 ARNTLO00327 626 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 KPNA3O00505 521 aaPredicted RBP19.41■□□□□ 0.7
CLN6-205ENST00000564846 NIPSNAP2O75323 286 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 HSPA4LO95757 839 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 HLA-EP13747 358 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 UGT1A6P19224 532 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 POU3F3P20264 500 aaPredicted RBP19.41■□□□□ 0.7
CLN6-205ENST00000564846 CHRM3P20309 590 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 UGT1A1P22309 533 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 UGT1A4P22310 534 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 UGT1A3P35503 534 aa19.41■□□□□ 0.7
CLN6-205ENST00000564846 UGT1A5P35504 534 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms