RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 HADHBP55084 474 aaKnown RBP18.38■□□□□ 0.53
CLN6-204ENST00000564752 DYNLT1P63172 113 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 SQSTM1Q13501 440 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 DOK6Q6PKX4 331 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 ZNF765Q7L2R6 523 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 DTX1Q86Y01 620 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 SGF29Q96ES7 293 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 PANX2Q96RD6 677 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 AGAP2Q99490 1192 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 TDRD1Q9BXT4 1180 aaKnown RBP18.38■□□□□ 0.53
CLN6-204ENST00000564752 CDH19Q9H159 772 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 AKAP7Q9P0M2 348 aaPredicted RBP18.38■□□□□ 0.53
CLN6-204ENST00000564752 PCDHA13Q9Y5I0 950 aa18.38■□□□□ 0.53
CLN6-204ENST00000564752 IGHV5-10-1A0A0J9YXX1 117 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 HGSO14964 777 aaPredicted RBP18.37■□□□□ 0.53
CLN6-204ENST00000564752 PRLP01236 227 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 PYGLP06737 847 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 CCL4P13236 92 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 CD82P27701 267 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 ACTR1BP42025 376 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 STC1P52823 247 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 ACTR1AP61163 376 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 IFI35P80217 286 aaPredicted RBP18.37■□□□□ 0.53
CLN6-204ENST00000564752 AP1B1Q10567 949 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 BIRC2Q13490 618 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 PDK1Q15118 436 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 LINC00303Q3SY05 128 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 PYCR3Q53H96 274 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 RAVER1Q8IY67 606 aaKnown RBP18.37■□□□□ 0.53
CLN6-204ENST00000564752 NRSN1Q8IZ57 195 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 ARRDC2Q8TBH0 407 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 COX14Q96I36 57 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 OR2M4Q96R27 311 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 CHKBQ9Y259 395 aa18.37■□□□□ 0.53
CLN6-204ENST00000564752 IPO7O95373 1038 aaKnown RBP18.36■□□□□ 0.53
CLN6-204ENST00000564752 JCHAINP01591 159 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 LIMK2P53671 638 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 NIPAL4Q0D2K0 466 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 ZBTB17Q13105 803 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 TRA2AQ13595 282 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLN6-204ENST00000564752 MANEAQ5SRI9 462 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 TMEM164Q5U3C3 297 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 NKAIN2Q5VXU1 208 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 MFSD7Q6UXD7 560 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 NPNTQ6UXI9 565 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 TRIM74Q86UV6 250 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 EXD3Q8N9H8 876 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 RCBTB1Q8NDN9 531 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 EXD1Q8NHP7 514 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 OLFM3Q96PB7 478 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 RIOK2Q9BVS4 552 aaKnown RBP18.36■□□□□ 0.53
CLN6-204ENST00000564752 DNPEPQ9ULA0 475 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 TFR2Q9UP52 801 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 PCDHB11Q9Y5F2 797 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 ALG6Q9Y672 507 aa18.36■□□□□ 0.53
CLN6-204ENST00000564752 IGHV1OR21-1A0A087WYE8 117 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
CLN6-204ENST00000564752 SOWAHDA6NJG2 315 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.35■□□□□ 0.53
CLN6-204ENST00000564752 CLDN7O95471 211 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 CD86P42081 329 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 RPL26P61254 145 aaKnown RBP18.35■□□□□ 0.53
CLN6-204ENST00000564752 TFDP2Q14188 446 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 C11orf63Q6NUN7 778 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 XKR5Q6UX68 686 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 MARK2Q7KZI7 788 aaKnown RBP18.35■□□□□ 0.53
CLN6-204ENST00000564752 TMTC1Q8IUR5 882 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 LPCAT1Q8NF37 534 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 OR4D9Q8NGE8 314 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 CCDC74BQ96LY2 380 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 LYSMD1Q96S90 227 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 CEP41Q9BYV8 373 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 PCDH9Q9HC56 1237 aa18.35■□□□□ 0.53
CLN6-204ENST00000564752 RPL26L1Q9UNX3 145 aaKnown RBP18.35■□□□□ 0.53
CLN6-204ENST00000564752 SCN8AQ9UQD0 1980 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 BSNQ9UPA5 3926 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 NDUFA10O95299 355 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 ITGB2P05107 769 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 FGF3P11487 239 aaPredicted RBP18.34■□□□□ 0.53
CLN6-204ENST00000564752 CDKN2BP42772 138 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 LRP8Q14114 963 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 KAZNQ674X7 775 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 SPOCD1Q6ZMY3 1216 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 VASH2Q86V25 355 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 GAS2L3Q86XJ1 694 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 GALNT13Q8IUC8 556 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 CNTD1Q8N815 330 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 TAAR9Q96RI9 348 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 WDR24Q96S15 920 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 DPYSL5Q9BPU6 564 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 KCNK4Q9NYG8 393 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 CNOT6Q9ULM6 557 aaKnown RBP18.34■□□□□ 0.53
CLN6-204ENST00000564752 PCDHGA3Q9Y5H0 932 aa18.34■□□□□ 0.53
CLN6-204ENST00000564752 EPN1Q9Y6I3 576 aaPredicted RBP18.34■□□□□ 0.53
CLN6-204ENST00000564752 BOD1L1Q8NFC6 3051 aa18.33■□□□□ 0.53
CLN6-204ENST00000564752 TRBV23OR9-2A0A075B6M9 112 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 INPP4BO15327 924 aa18.33■□□□□ 0.52
CLN6-204ENST00000564752 DNAJC6O75061 913 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms