RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CR2P20023 1033 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ATP5F1P24539 256 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SERPINB5P36952 375 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC26A3P40879 764 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CSKP41240 450 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NBL1P41271 181 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RGRP47804 291 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NUMBP49757 651 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARSDP51689 593 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF140P52738 457 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SEC13P55735 322 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AP1S1P61966 158 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARF5P84085 180 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RIPK1Q13546 671 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RCN2Q14257 317 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LRRC32Q14392 662 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CSHL1Q14406 222 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF460Q14592 562 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 IHHQ14623 411 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CYTH1Q15438 398 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TAF1AQ15573 450 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GAB4Q2WGN9 574 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MPPE1Q53F39 396 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 INO80DQ53TQ3 878 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RBM20Q5T481 1227 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HECTD2Q5U5R9 776 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GRAMD4Q6IC98 578 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RETSATQ6NUM9 610 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GLT6D1Q7Z4J2 308 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SDCCAG8Q86SQ7 713 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CEP97Q8IW35 865 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MFN1Q8IWA4 741 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARHGAP24Q8N264 748 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CPXM2Q8N436 756 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FSTL5Q8N475 847 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AFAP1L2Q8N4X5 818 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TMEM105Q8N8V8 129 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OR6Y1Q8NGX8 325 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NXNL1Q96CM4 212 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CCDC126Q96EE4 140 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TMA16Q96EY4 203 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PTCD3Q96EY7 689 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 EXOC2Q96KP1 924 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TBATAQ96M53 351 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NELL2Q99435 816 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NDNQ99608 321 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OMDQ99983 421 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GATA5Q9BWX5 397 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 C20orf27Q9GZN8 174 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NMUR2Q9GZQ4 415 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CDH19Q9H159 772 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 POPDC3Q9HBV1 291 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GPAMQ9HCL2 828 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FBRSL1Q9HCM7 1045 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARL8BQ9NVJ2 186 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NLE1Q9NVX2 485 aaPredicted RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CPSF2Q9P2I0 782 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DEC1Q9P2X7 70 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LHX3Q9UBR4 397 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 BAIAP2L1Q9UHR4 511 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 VPS9D1Q9Y2B5 631 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RAP2CQ9Y3L5 183 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 KCTD3Q9Y597 815 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 RAI2Q9Y5P3 530 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ACTL7AQ9Y615 435 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ARL5AQ9Y689 179 aa7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FLNBO75369 2602 aaKnown RBP7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 BPTFQ12830 3046 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 TBC1D3BA6NDS4 549 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 OR51F1A6NGY5 319 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 F8W8V4 182 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLCO1B7G3V0H7 640 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GFRA2O00451 464 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 CCL22O00626 93 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AURKAO14965 403 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DLX3O60479 287 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 NPHS1O60500 1241 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SNAP91O60641 907 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 DIAPH2O60879 1101 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ZMPSTE24O75844 475 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 ATP6V1G2O95670 118 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 S1PR4O95977 384 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC4A1P02730 911 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PIRTP0C851 137 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 T-ENOLP0DO92 83 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 HOXB3P14651 431 aaPredicted RBP7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 LPOP22079 712 aaPredicted RBP7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 FDXRP22570 491 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MZF1P28698 734 aaPredicted RBP7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 PMLP29590 882 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 AVPR2P30518 371 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 SLC8A1P32418 973 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 MAPK8P45983 427 aa7.4□□□□□ -1.22
MAP1LC3B-205ENST00000564638 GRIA4P48058 902 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms