RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 PCYT1BQ9Y5K3 369 aaPredicted RBP13.98□□□□□ -0.17
CDR2-204ENST00000564542 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 A6NCN8 305 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 STK17BO94768 372 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 ASMTLO95671 621 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 SLC2A4P14672 509 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 EPHB1P54762 984 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 SLC25A11Q02978 314 aaKnown RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 ITKQ08881 620 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 NFATC2Q13469 925 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 PIGHQ14442 188 aaPredicted RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 CRTC2Q53ET0 693 aaPredicted RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 TXNRD3NBQ6F5E7 133 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 IYDQ6PHW0 289 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 TIPARPQ7Z3E1 657 aaKnown RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 SLC9B2Q86UD5 537 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 NIPA2Q8N8Q9 360 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 STARD8Q92502 1023 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 NCSTNQ92542 709 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 TDRD1Q9BXT4 1180 aaKnown RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 EPB41L1Q9H4G0 881 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 RMI1Q9H9A7 625 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 ZNHIT2Q9UHR6 403 aa13.97□□□□□ -0.17
CDR2-204ENST00000564542 SPENQ96T58 3664 aaKnown RBP13.97□□□□□ -0.17
CDR2-204ENST00000564542 MN1Q10571 1320 aaPredicted RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 MFSD11O43934 449 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 DLGAP3O95886 979 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 F3P13726 295 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 CA4P22748 312 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 CES1P23141 567 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 GARSP41250 739 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 MC1RQ01726 317 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 KLHL30Q0D2K2 578 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 GALNT2Q10471 571 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 MAP7Q14244 749 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 IHHQ14623 411 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 KDELC2Q7Z4H8 507 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 UNC5BQ8IZJ1 945 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 AOPEPQ8N6M6 819 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 AVL9Q8NBF6 648 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 APOBEC4Q8WW27 367 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 MAML1Q92585 1016 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 LYSMD1Q96S90 227 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 ISCUQ9H1K1 167 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 APMAPQ9HDC9 416 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 ZNF71Q9NQZ8 489 aaPredicted RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 HAUS2Q9NVX0 235 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 CNOT6Q9ULM6 557 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 KCNK6Q9Y257 313 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 PRKAB1Q9Y478 270 aa13.96□□□□□ -0.17
CDR2-204ENST00000564542 OAS3Q9Y6K5 1087 aaKnown RBP13.96□□□□□ -0.17
CDR2-204ENST00000564542 KIR2DS5A0A0G2JLQ3 304 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 A0A0G2JNG1 304 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 CLEC18AA5D8T8 446 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 KIR2DS3K7RE56 304 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 POLR1CO15160 346 aaPredicted RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 CLDN7O95471 211 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 ACP5P13686 325 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 IL4RP24394 825 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 STAT5AP42229 794 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 MAPK9P45984 424 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 NOP2P46087 812 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 ZNF165P49910 485 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 DSC2Q02487 901 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 SEPT6Q14141 434 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 KRT81Q14533 505 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 KIR2DS5Q14953 304 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 HENMT1Q5T8I9 393 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 TIGD7Q6NT04 549 aaPredicted RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 CLEC18BQ6UXF7 455 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 PHYKPLQ8IUZ5 450 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 ESX1Q8N693 406 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 CLEC18CQ8NCF0 446 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 FATE1Q969F0 183 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 SIDT1Q9NXL6 827 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 KLHL3Q9UH77 587 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 RPL26L1Q9UNX3 145 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 CHKBQ9Y259 395 aa13.95□□□□□ -0.18
CDR2-204ENST00000564542 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
CDR2-204ENST00000564542 C1orf232A0A0U1RR37 186 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 LILRA5A6NI73 299 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 OR5K4A6NMS3 321 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 MATN3O15232 486 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 SNX2O60749 519 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 PRLP01236 227 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 NTRK1P04629 796 aa13.94□□□□□ -0.18
CDR2-204ENST00000564542 TCN2P20062 427 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms