RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MMABQ96EY8 250 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 LRRC1Q9BTT6 524 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 PREBQ9HCU5 417 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 C9orf78Q9NZ63 289 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 ACSL5Q9ULC5 683 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 FAF1Q9UNN5 650 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 A0A1B0GVC2 190 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 DVL1O14640 695 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 ZNHIT1O43257 154 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 PAGE4O60829 102 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 FGF5P12034 268 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 POLR2CP19387 275 aaPredicted RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 PBX3P40426 434 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 RGS2P41220 211 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 APOBEC1P41238 236 aaKnown RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 FASLGP48023 281 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 CRIP2P52943 208 aaPredicted RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 DVL1P1P54792 670 aaPredicted RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 OLR1P78380 273 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 COG7P83436 770 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 CEBPZQ03701 1054 aaKnown RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 DCTN2Q13561 401 aaKnown RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 TMEM35AQ53FP2 167 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 DCST1Q5T197 706 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 C18orf63Q68DL7 685 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 OR7E24Q6IFN5 339 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 GPR180Q86V85 440 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 SLC44A1Q8WWI5 657 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 INTS12Q96CB8 462 aaKnown RBP4.62□□□□□ -1.67
UBR1-205ENST00000564540 TBATAQ96M53 351 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 STRA6Q9BX79 667 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 LTB4R2Q9NPC1 389 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 FBXL2Q9UKC9 423 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 GTF2A1LQ9UNN4 478 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 GAB2Q9UQC2 676 aa4.62□□□□□ -1.67
UBR1-205ENST00000564540 A0A1W2PPH5 198 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 M0QZ24 198 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 SEC14L2O76054 403 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 AMBPP02760 352 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 AMPHP49418 695 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 EEF1A1P68104 462 aaKnown RBP4.61□□□□□ -1.67
UBR1-205ENST00000564540 RUNX1T1Q06455 604 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 SIRPB2Q5JXA9 342 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 PDSS1Q5T2R2 415 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 EEF1A1P5Q5VTE0 462 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 EXOC8Q8IYI6 725 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 OR52I2Q8NH67 350 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 PERPQ96FX8 193 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 HARBI1Q96MB7 349 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 TMEM68Q96MH6 324 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 SCRT2Q9NQ03 307 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 HCFC1R1Q9NWW0 138 aa4.61□□□□□ -1.67
UBR1-205ENST00000564540 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 CTAGE9A4FU28 777 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 KCNK5O95279 499 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 MLYCDO95822 493 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 CTAGE8P0CG41 777 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 NR1D1P20393 614 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 UBA1P22314 1058 aaKnown RBP4.6□□□□□ -1.67
UBR1-205ENST00000564540 HOXC9P31274 260 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 UBA7P41226 1012 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 RPL7AP62424 266 aaKnown RBP4.6□□□□□ -1.67
UBR1-205ENST00000564540 MAD2L1Q13257 205 aaPredicted RBP4.6□□□□□ -1.67
UBR1-205ENST00000564540 DPCR1Q3MIW9 517 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 MAP7D3Q8IWC1 876 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 CTAGE4Q8IX94 777 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 FBXO17Q96EF6 278 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 LINGO1Q96FE5 620 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 RANBP17Q9H2T7 1088 aaKnown RBP4.6□□□□□ -1.67
UBR1-205ENST00000564540 FKRPQ9H9S5 495 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 JMJD4Q9H9V9 463 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 POLR1BQ9H9Y6 1135 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 DLGAP2Q9P1A6 1054 aa4.6□□□□□ -1.67
UBR1-205ENST00000564540 ZCWPW2A0A1B0GU75 182 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 A0A1W2PRG0 241 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM90A26D6RGX4 464 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM72CH0Y354 149 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 NTN3O00634 580 aaPredicted RBP4.59□□□□□ -1.67
UBR1-205ENST00000564540 HS3ST1O14792 307 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 ANKRD28O15084 1053 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 ZG16O60844 167 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 SPARCP09486 303 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM106CPP0CH98 169 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 CDC16Q13042 620 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 CCNG2Q16589 344 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM72AQ5TYM5 149 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM72DQ6L9T8 149 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 ATG9AQ7Z3C6 839 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 FAM72BQ86X60 149 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 IL17REQ8NFR9 667 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 THAP6Q8TBB0 222 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 ZNF501Q96CX3 271 aaPredicted RBP4.59□□□□□ -1.67
UBR1-205ENST00000564540 WDFY2Q96P53 400 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 SMC6Q96SB8 1091 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 SEC62Q99442 399 aaKnown RBP4.59□□□□□ -1.67
UBR1-205ENST00000564540 NEURL2Q9BR09 285 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 RANGRFQ9HD47 186 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms