RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 CHRNA4P43681 627 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 C21orf59P57076 290 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 BNC1Q01954 994 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 SPARCL1Q14515 664 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 HLA-BQ31612 363 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 DUPD1Q68J44 220 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 HIBCHQ6NVY1 386 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 TRAM1L1Q8N609 369 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 HEXDCQ8WVB3 486 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 KLHDC7BQ96G42 594 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 BBC3Q96PG8 261 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 APOL2Q9BQE5 337 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 CARD6Q9BX69 1037 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 PHPT1Q9NRX4 125 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 IL17CQ9P0M4 197 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 MTRF1LQ9UGC7 380 aaKnown RBP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 GGT7Q9UJ14 662 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 PCDHGB2Q9Y5G2 931 aa18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 TP53BP1Q12888 1972 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-203ENST00000563869 F8W8V4 182 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 H7C0S8 307 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 CACNB4O00305 520 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 PFDN6O15212 129 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 YKT6O15498 198 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 FLRT2O43155 660 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 PRKCGP05129 697 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 IVDP26440 423 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 THOP1P52888 689 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 CBLBQ13191 982 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 CUL1Q13616 776 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 HIF1AQ16665 826 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 DENND2CQ68D51 928 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 HSD11B1LQ7Z5J1 315 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 ABI3BPQ7Z7G0 1075 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 PRUNE1Q86TP1 453 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 TSPAN33Q86UF1 283 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 TTC30BQ8N4P2 665 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 RHBDD1Q8TEB9 315 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 SCG3Q8WXD2 468 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 SEC14L1Q92503 715 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 ULK4Q96C45 1275 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 SERPINB12Q96P63 405 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 TRIM51Q9BSJ1 452 aa18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 ZCCHC2Q9C0B9 1178 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 FNDC3AQ9Y2H6 1198 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 GCN1Q92616 2671 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-203ENST00000563869 CELSR3Q9NYQ7 3312 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 APC2O95996 2303 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 MROH6A6NGR9 719 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 A8MX80 341 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 C1SP09871 688 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 PSMA3P25788 255 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 ETV3P41162 512 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 GPR1P46091 355 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 ITGA8P53708 1063 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 SEPT6Q14141 434 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 POU6F1Q14863 301 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 GPR33Q49SQ1 333 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 HENMT1Q5T8I9 393 aaKnown RBP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 LYPLAL1Q5VWZ2 237 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 PNCKQ6P2M8 343 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 ADAMTSL4Q6UY14 1074 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 Q6ZVL8 140 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 CENPUQ71F23 418 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 IFT20Q8IY31 132 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 GALNT15Q8N3T1 639 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 EIF1ADQ8N9N8 165 aaKnown RBP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 TP53I13Q8NBR0 393 aaPredicted RBP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 C1orf216Q8TAB5 229 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 SGSM3Q96HU1 749 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 VPS35Q96QK1 796 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 KLF6Q99612 283 aaPredicted RBP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 WDR26Q9H7D7 661 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 ERVMER34-1Q9H9K5 563 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 TM9SF3Q9HD45 589 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 NLE1Q9NVX2 485 aaPredicted RBP18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 TCAF1Q9Y4C2 921 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 SPO11Q9Y5K1 396 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 TMEM131Q92545 1883 aa18.79■□□□□ 0.6
SYNGR3-203ENST00000563869 GLYATL1P3A0A0U1RQE8 302 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 LDB2O43679 373 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 POLBP06746 335 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 TUBBP07437 444 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 PIRTP0C851 137 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 ITGALP20701 1170 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 MCM3P25205 808 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 TRIM23P36406 574 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 MAGEA3P43357 314 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 RPL21P46778 160 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 BLKP51451 505 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 SESN2P58004 480 aaPredicted RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 ILF2Q12905 390 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 MSLNQ13421 630 aaPredicted RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 PEX6Q13608 980 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 SUZ12Q15022 739 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 WSCD2Q2TBF2 565 aa18.78■□□□□ 0.6
SYNGR3-203ENST00000563869 AARS2Q5JTZ9 985 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms