RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZCWPW2A0A1B0GU75 182 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 TTC36A6NLP5 189 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 LRRC53A6NM62 1247 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 EIF3DO15371 548 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 TNFSF14O43557 240 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SYNGR3O43761 229 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 INHBAP08476 426 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 VAMP2P63027 116 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 NEXNQ0ZGT2 675 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 PTP4A2Q12974 167 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 GAGE5Q13069 117 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 GAGE6Q13070 117 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 BAK1Q16611 211 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 DECR1Q16698 335 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 WDR38Q5JTN6 314 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 DCST1Q5T197 706 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 FAM69AQ5T7M9 428 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC9C2Q5TAH2 1124 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SFMBT2Q5VUG0 894 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC27A1Q6PCB7 646 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 CACNA2D4Q7Z3S7 1137 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 MAP7D3Q8IWC1 876 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 THAP6Q8TBB0 222 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC44A1Q8WWI5 657 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 APBB2Q92870 758 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SCRN2Q96FV2 425 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 PCGF1Q9BSM1 259 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 MOV10L1Q9BXT6 1211 aaKnown RBP3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 KIF9Q9HAQ2 790 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC28A3Q9HAS3 691 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 RRN3Q9NYV6 651 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF624Q9P2J8 865 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 FBXL2Q9UKC9 423 aa3.13□□□□□ -1.91
HMGB1P33-201ENST00000563485 IGKV3D-15A0A087WSY6 115 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 SMIM1B2RUZ4 78 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 BLOC1S5-TXNDC5H3BN57 136 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 PRKNO60260 465 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 CTSVO60911 334 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 IL7RP16871 459 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 CPOXP36551 454 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 APOBEC1P41238 236 aaKnown RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 PAFAH1B1P43034 410 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 CTCFP49711 727 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 COG7P83436 770 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 PLIN5Q00G26 463 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 GSTA3Q16772 222 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 ATF7IPQ6VMQ6 1270 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF704Q6ZNC4 412 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 MYPOPQ86VE0 399 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 ADSSL1Q8N142 457 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 STPG4Q8N801 248 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 GTF3C6Q969F1 213 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 IGSF8Q969P0 613 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 RNF125Q96EQ8 232 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 STAMBPL1Q96FJ0 436 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 NEUROD6Q96NK8 337 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 SCLT1Q96NL6 688 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 LTB4R2Q9NPC1 389 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 ASAH2Q9NR71 780 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 MARCH4Q9P2E8 410 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 POLG2Q9UHN1 485 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 INTS6Q9UL03 887 aaKnown RBP3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 MKLN1Q9UL63 735 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 CAMK2AQ9UQM7 478 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 KCNK7Q9Y2U2 307 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 CAPN7Q9Y6W3 813 aa3.12□□□□□ -1.91
HMGB1P33-201ENST00000563485 RRN3P2A6NIE6 340 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 NCAM2O15394 837 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 HOXC11O43248 304 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 PCDH7O60245 1069 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 CIDEAO60543 219 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 F9P00740 461 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 RNF224P0DH78 156 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ABCD3P28288 659 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 AHRP35869 848 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 UBA7P41226 1012 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 PIP4K2AP48426 406 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ARCN1P48444 511 aaKnown RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 GRIK2Q13002 908 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 CXorf66Q5JRM2 361 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF772Q68DY9 489 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF497Q6ZNH5 498 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 C15orf39Q6ZRI6 1047 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ADAD2Q8NCV1 583 aaKnown RBP3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF248Q8NDW4 579 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 OR14L1PQ8NHC6 308 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 HTRA1Q92743 480 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 USP44Q9H0E7 712 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 SLC52A3Q9NQ40 469 aa3.11□□□□□ -1.91
HMGB1P33-201ENST00000563485 KIAA1210Q9ULL0 1709 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 FAM237AA0A1B0GTK4 181 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 OR5K3A6NET4 321 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 FAM90A26D6RGX4 464 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 HS3ST1O14792 307 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 ANKRD28O15084 1053 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 ZNF500O60304 480 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 HOXC9P31274 260 aa3.1□□□□□ -1.91
HMGB1P33-201ENST00000563485 ARL1P40616 181 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms