RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CLCN5P51795 746 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 PGGT1BP53609 377 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 GYS2P54840 703 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CREB5Q02930 508 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 ZBTB16Q05516 673 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CCDC15Q0P6D6 951 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 DBN1Q16643 649 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 GPR33Q49SQ1 333 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 HENMT1Q5T8I9 393 aaKnown RBP10.1□□□□□ -0.79
SMG1-208ENST00000563448 TRIM67Q6ZTA4 783 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 SYT13Q7L8C5 426 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CMC1Q7Z7K0 106 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 NRSN1Q8IZ57 195 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 GJD3Q8N144 294 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 TRAM1L1Q8N609 369 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 GPATCH11Q8N954 259 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 DTX3LQ8TDB6 740 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CXorf40AQ8TE69 158 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 GANCQ8TET4 914 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 DTD2Q96FN9 168 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 ELMO2Q96JJ3 720 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 SMC6Q96SB8 1091 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 NELL2Q99435 816 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 NDNQ99608 321 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 RIOK2Q9BVS4 552 aaKnown RBP10.1□□□□□ -0.79
SMG1-208ENST00000563448 SPATA16Q9BXB7 569 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 TBC1D17Q9HA65 648 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 SNX15Q9NRS6 342 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 RAD18Q9NS91 495 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CRLS1Q9UJA2 301 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 SLC39A10Q9ULF5 831 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 COL6A3P12111 3177 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 UBA6A0AVT1 1052 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 TYROBPO43914 113 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 LZTS3O60299 673 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 OR1I1O60431 355 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 RECQL5O94762 991 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 SAT1P21673 171 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 TYK2P29597 1187 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FMO4P31512 558 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 POLD2P49005 469 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 SERPINB8P50452 374 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 ATP1A2P50993 1020 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 TAS2R39P59534 338 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 ITGA9Q13797 1035 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 MPP2Q14168 576 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 PPM1JQ5JR12 505 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 AARS2Q5JTZ9 985 aaKnown RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 HECTD2Q5U5R9 776 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 KIAA1324Q6UXG2 1013 aaKnown RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 CERS6Q6ZMG9 384 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 KDM7AQ6ZMT4 941 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 USP30Q70CQ3 517 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 CEP97Q8IW35 865 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 PELI3Q8N2H9 469 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 NXPE1Q8N323 547 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 BANPQ8N9N5 519 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FAM76AQ8TAV0 307 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG1-208ENST00000563448 NUS1Q96E22 293 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 SELENOSQ9BQE4 189 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 CDH19Q9H159 772 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 SSU72Q9NP77 194 aaKnown RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 IGLON5A6NGN9 336 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FADS2P1A8MWK0 482 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 PCDH8O95206 1070 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 ACADMP11310 421 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 GMPRP36959 345 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 PTGER3P43115 390 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 ADPRHP54922 357 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 TIAL1Q01085 375 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG1-208ENST00000563448 PDE1CQ14123 709 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 USP10Q14694 798 aaKnown RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 CTSL3PQ5NE16 218 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FAM45BPQ6NSW5 357 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 OR14C36Q8NHC7 312 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FAM45AQ8TCE6 357 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 ACMSDQ8TDX5 336 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 AP2M1Q96CW1 435 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 BIRC8Q96P09 236 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 OLFM1Q99784 485 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 AARSD1Q9BTE6 412 aaKnown RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 BOCQ9BWV1 1114 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 P2RY12Q9H244 342 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 KCNK9Q9NPC2 374 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 PCMTD2Q9NV79 361 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 FZD4Q9ULV1 537 aa10.09□□□□□ -0.79
SMG1-208ENST00000563448 CORO1CQ9ULV4 474 aaPredicted RBP10.09□□□□□ -0.79
SMG1-208ENST00000563448 ZFR2Q9UPR6 939 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms