RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 RAP1GAPP47736 663 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PSMD8P48556 350 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 GATMP50440 423 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SERPINB9P50453 376 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TOB1P50616 345 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PGDP52209 483 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PLK1P53350 603 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ATXN1P54253 815 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PRKAA2P54646 552 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 UGT2B15P54855 530 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CASP6P55212 293 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ACTR1AP61163 376 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ERVK-8P63133 956 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZNF200P98182 395 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 ATP2C1P98194 919 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PPARDQ03181 441 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PTH1RQ03431 593 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 GLO1Q04760 184 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CLCQ05315 142 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PRKCZQ05513 592 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 RGS1Q08116 209 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 LMAN2Q12907 356 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 STX5Q13190 355 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SLC29A2Q14542 456 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 RAB39AQ14964 217 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TRAM2Q15035 370 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 DHCR24Q15392 516 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SPA17Q15506 151 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CHRNA2Q15822 529 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SSX2Q16385 188 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CA9Q16790 459 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 DUSP6Q16828 381 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ERFEQ4G0M1 354 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PABPC1L2AQ5JQF8 200 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 RALGPS1Q5JS13 557 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 RARS2Q5T160 578 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 STXBP5Q5T5C0 1151 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 LIN9Q5TKA1 542 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZNF772Q68DY9 489 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 KDM4DQ6B0I6 523 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 OR5M10Q6IEU7 315 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CENPPQ6IPU0 288 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SLC25A24Q6NUK1 477 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 WDR73Q6P4I2 378 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CNNM4Q6P4Q7 775 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 BLOC1S2Q6QNY1 142 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 IGF2-ASQ6U949 168 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 DLEU7Q6UYE1 221 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZNF782Q6ZMW2 699 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 TMEM26Q6ZUK4 368 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 USP53Q70EK8 1073 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TRMT10CQ7L0Y3 403 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 NLRC3Q7RTR2 1065 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 OTOAQ7RTW8 1153 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 EFL1Q7Z2Z2 1120 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 CAMKMTQ7Z624 323 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SH3RF1Q7Z6J0 888 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 LRRTM4Q86VH4 590 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 AMIGO1Q86WK6 493 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 LYSMD2Q8IV50 215 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZC3H7AQ8IWR0 971 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 DDX60Q8IY21 1712 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 ABRAQ8N0Z2 381 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PGBD3Q8N328 593 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 FAM26EQ8N5C1 309 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PPM1NQ8N819 430 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZNF321PQ8N8H1 164 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TTC29Q8NA56 475 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 ATG16L2Q8NAA4 619 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PNMA1Q8ND90 353 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 DENND6BQ8NEG7 585 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 MCPH1Q8NEM0 835 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 OR6Q1Q8NGQ2 317 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 OR6B3Q8NGW1 331 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 PNPT1Q8TCS8 783 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PHF10Q8WUB8 498 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PPP1R13LQ8WUF5 828 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ASB12Q8WXK4 309 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 USP7Q93009 1102 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TCEAL3Q969E4 200 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PTERQ96BW5 349 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 GPRASP2Q96D09 838 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 MTMR8Q96EF0 704 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 MAGED4Q96JG8 741 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 CNOT6LQ96LI5 555 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZNF285Q96NJ3 590 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZBTB18Q99592 522 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 IL12RB2Q99665 862 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 EIF2AK1Q9BQI3 630 aaKnown RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 PTDSS2Q9BVG9 487 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 OSBPL11Q9BXB4 747 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 GSDMCQ9BYG8 508 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SEMA6CQ9H3T2 930 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 C12orf49Q9H741 205 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 SEBOXQ9HB31 216 aaPredicted RBP4.93□□□□□ -1.62
TCF4-215ENST00000562638 ZFP14Q9HCL3 533 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 EQTNQ9NQ60 294 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 BIN3Q9NQY0 253 aa4.93□□□□□ -1.62
TCF4-215ENST00000562638 TOPORSQ9NS56 1045 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms