RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PURAQ00577 322 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 SELPLGQ14242 412 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CDK10Q15131 360 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 PKDCCQ504Y2 493 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CES3Q6UWW8 571 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 OTOP3Q7RTS5 596 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 LACC1Q8IV20 430 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 PLD5Q8N7P1 536 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 PIK3C3Q8NEB9 887 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CHRAC1Q9NRG0 131 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 COX16Q9P0S2 106 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 SLCO1B7G3V0H7 640 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 TK2O00142 265 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 HAS3O00219 553 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 TBX1O43435 398 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 UPK1BO75841 260 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 INMTO95050 263 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CRHBPP24387 322 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 GP5P40197 560 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 EIF2DP41214 584 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 PRPSAP1Q14558 356 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 IMPG1Q17R60 797 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 RASSF5Q8WWW0 418 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 VPS35Q96QK1 796 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CITED4Q96RK1 184 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 RUBCNLQ9H714 662 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 FIS1Q9Y3D6 152 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 H0Y858 1186 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 PIRO00625 290 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 STAU1O95793 577 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 SDC4P31431 198 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 HK2P52789 917 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC6A3Q01959 620 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 MAPRE2Q15555 327 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ATAD3CQ5T2N8 411 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 STEAP3Q658P3 488 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 OSTM1Q86WC4 334 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 RHOXF1Q8NHV9 184 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 MAP6Q96JE9 813 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ZFYVE19Q96K21 471 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ITM2CQ9NQX7 267 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 STMN3Q9NZ72 180 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ISPDA4D126 451 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 EVPLLA8MZ36 301 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ARHGAP33O14559 1287 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 BEST1O76090 585 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 FKBP9O95302 570 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 MT-ND1P03886 318 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 HTR1AP08908 422 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 BCAR1P56945 870 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 DPY19L1Q2PZI1 675 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 OTUD3Q5T2D3 398 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 LIPMQ5VYY2 423 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 LSMEM2Q8N112 164 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 CADM2Q8N3J6 435 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 LSM14AQ8ND56 463 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 APPL2Q8NEU8 664 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 ACE2Q9BYF1 805 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 IL1RL2Q9HB29 575 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 TMPRSS4Q9NRS4 437 aa13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 MYO18AQ92614 2054 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-203ENST00000562609 AQP12BA6NM10 295 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 ERVH48-1M5A8F1 160 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 SDHDO14521 159 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 IL4RP24394 825 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 LILRA4P59901 499 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 VBP1P61758 197 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 C19orf57Q0VDD7 668 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 FXNQ16595 210 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 TBPL2Q6SJ96 375 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 AQP12AQ8IXF9 295 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 GALNT12Q8IXK2 581 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 LRRC52Q8N7C0 313 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 MUL1Q969V5 352 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 RPL10LQ96L21 214 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 MYRFLQ96LU7 910 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 RNF157Q96PX1 679 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 SNRNP25Q9BV90 132 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 ZNF717Q9BY31 904 aaPredicted RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 TRIM15Q9C019 465 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 C8orf4Q9NR00 106 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 KCNN3Q9UGI6 736 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 GABRQQ9UN88 632 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 PTGESO14684 152 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 MTSS1O43312 755 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 SNRPB2P08579 225 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 TPSB2P20231 275 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 MGAT1P26572 445 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 GP2P55259 537 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 NAB1Q13506 487 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 TPSAB1Q15661 275 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms