RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 CAMK1DQ8IU85 385 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 ARHGEF19Q8IW93 802 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 SLC38A9Q8NBW4 561 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 GRHL3Q8TE85 626 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 SMAD5Q99717 465 aaKnown RBP6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 FRMD8Q9BZ67 464 aaPredicted RBP6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 PHACTR1Q9C0D0 580 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 DNAI2Q9GZS0 605 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 SCAND2PQ9GZW5 306 aaPredicted RBP6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 THAP9Q9H5L6 903 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 ARHGEF38Q9NXL2 777 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 DNAI1Q9UI46 699 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 PHTF1Q9UMS5 762 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 B3GNT3Q9Y2A9 372 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 SLC30A1Q9Y6M5 507 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 VPS13CQ709C8 3753 aa6.78□□□□□ -1.32
CNEP1R1-204ENST00000562576 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 IGLV3-10A0A075B6K4 115 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FAM72CH0Y354 149 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 MAPK13O15264 365 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TMCC1O94876 653 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TMEM63AO94886 807 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 GSRP00390 522 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 PLEKP08567 350 aaPredicted RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 PAEPP09466 180 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 SLC2A3P11169 496 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FOLR1P15328 257 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 MMP12P39900 470 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 RGRP47804 291 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 CXCR3P49682 368 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 NDST2P52849 883 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 HDAC4P56524 1084 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 AMPD3Q01432 767 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 Q0VFX4 171 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ILF3Q12906 894 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ADAM9Q13443 819 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 KYNUQ16719 465 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TBCELQ5QJ74 424 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FAM72AQ5TYM5 149 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FAM72DQ6L9T8 149 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TRNP1Q6NT89 227 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 LIPIQ6XZB0 460 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FAM183BPQ6ZVS7 135 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 MARK2Q7KZI7 788 aaKnown RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 MRGPRGQ86SM5 289 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FAM72BQ86X60 149 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TTC39CQ8N584 583 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ZBTB2Q8N680 514 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 OR10G6Q8NH81 332 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ATL2Q8NHH9 583 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 THAP4Q8WY91 577 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TP53INP1Q96A56 240 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ISG20Q96AZ6 181 aaKnown RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 PAGE5Q96GU1 130 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TGM7Q96PF1 710 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 SMIM14Q96QK8 99 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 CPXM1Q96SM3 734 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TMEM121Q9BTD3 319 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 GSDMCQ9BYG8 508 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 LRRC27Q9C0I9 530 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ILKAPQ9H0C8 392 aaPredicted RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 BRD8Q9H0E9 1235 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 LHX3Q9UBR4 397 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TBC1D29Q9UFV1 150 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 TRAF3IP3Q9Y228 551 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 RTTNQ86VV8 2226 aa6.77□□□□□ -1.33
CNEP1R1-204ENST00000562576 CCDC78A2IDD5 438 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 CALUO43852 315 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 RECKO95980 971 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 ERBB2P04626 1255 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 STSP08842 583 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 HOXC4P09017 264 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 XPAP23025 273 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 PSMC2P35998 433 aaKnown RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 GARSP41250 739 aaKnown RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 PER3P56645 1201 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 SNRPD1P62314 119 aaKnown RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 GPLD1P80108 840 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 TLE4Q04727 773 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 ATP1A4Q13733 1029 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 DCAF10Q5QP82 559 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 PLEKHA7Q6IQ23 1121 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 SPOCD1Q6ZMY3 1216 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 NCCRP1Q6ZVX7 275 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 PASD1Q8IV76 773 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 CBARPQ8N350 705 aaPredicted RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 GUF1Q8N442 669 aaKnown RBP6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 SFRP1Q8N474 314 aa6.76□□□□□ -1.33
CNEP1R1-204ENST00000562576 DTWD1Q8N5C7 304 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms